Rhodococcus sp. WB9: FND50_28790
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Entry
FND50_28790 CDS
T11350
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
rhwb Rhodococcus sp. WB9
Brite
KEGG Orthology (KO) [BR:
rhwb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhwb03021
]
FND50_28790
Transcription machinery [BR:
rhwb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FND50_28790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR
DUF7343
HTH_3
MarR_2
HTH_24
HTH_ParB
HTH_23
DUF8073_C
HTH_31
GerE
Sigma70_ECF
KORA
HNF-1_N
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QDQ94372
LinkDB
All DBs
Position
6152803..6153600
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AA seq
265 aa
AA seq
DB search
MTSHTHSGGHTARWPDEYQDVTALFEQMAALDEDDPRRRRLRDAVVTRCLPLAEHIARRF
DGRGEAHDDLVQVARLGLVNSVDRFDVERGSDFVSFAVPTIMGEVRRHFRDTGWAVRVPR
RMKELHLALSQAVAELSQSLGHAPTVSELAEHLDLEQEEVAQGLLAGNAYQTVSVDNTSS
DRTGELSMVETLGDYDAAMDDVENHETLRPLLQSLPERERTVLMLRFFGNMTQTQIADRV
GISQMHVSRLLAKTLASLRDQLGDA
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcccatactcacagtggggggcacacggcccgttggccggacgagtatcaggac
gtcacagcactcttcgaacagatggcagccctcgacgaggacgatccccggcgccgcaga
ctgcgggacgccgtcgtgacgcgctgtctcccactcgccgaacacatcgcgcgacgcttc
gacggccgcggcgaggcgcacgacgatctggttcaggtcgcgcgcctcggactggtcaac
tcggtcgaccggttcgacgtggagcggggatccgacttcgtgtcgttcgccgtccccacc
atcatgggcgaggtacgacggcacttccgcgacaccgggtgggccgtgcgagtaccccgc
cggatgaaggaactgcacctcgcgctcagccaggccgtcgccgaactgtcccagagcctc
ggtcacgcccccaccgtcagcgaactcgccgaacacctggacctcgaacaggaggaggtg
gcgcaggggctcctcgccggcaacgcgtatcagaccgtctccgtcgacaacacgtcgtcg
gaccggaccggcgagctgtcgatggtggagacactcggcgactacgacgccgcgatggac
gacgtcgagaaccacgaaaccctgcgccccctgctccaatctctccccgaacgagagcgg
accgtcctcatgctgcggttcttcggcaacatgacacagacccagatcgccgaccgagtc
ggcatctcgcagatgcacgtgtcccggttgctggcgaagacactggcgtcactgcgagat
caactcggtgatgcgtag
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