Rhodococcus sp. W8901: HUN07_09025
Help
Entry
HUN07_09025 CDS
T11420
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rhwq Rhodococcus sp. W8901
Pathway
rhwq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhwq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUN07_09025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhwq03019
]
HUN07_09025
03009 Ribosome biogenesis [BR:
rhwq03009
]
HUN07_09025
Enzymes [BR:
rhwq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HUN07_09025
Messenger RNA biogenesis [BR:
rhwq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUN07_09025
Ribosome biogenesis [BR:
rhwq03009
]
Prokaryotic type
rRNA helicases
HUN07_09025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QKT10842
LinkDB
All DBs
Position
1886511..1888292
Genome browser
AA seq
593 aa
AA seq
DB search
MSDTERDPQSDNNPITFADLEIDERVLKALSDVGYESPSPIQAATIPPLLAGKDVVGLAQ
TGTGKTAAFAIPILSRLDVDRKVPQALILAPTRELALQVAEAFGKYSAHIPGLHVLPIYG
GQAYGVQLSGLRRGAQIIVGTPGRVIDHLEKGTLDLSNLEYLVLDEADEMLKMGFQDDVE
RILADTPEYKQVALFSATMPPAIRKISKQYLHDPVEITVKSKTATASNITQRWVQVAHQR
KLDALTRILEVETFEAMIIFVRTKQATEDLAERLRARGFSAAAINGDIVQAQRERTIGQL
KSGALDILVATDVAARGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRTGDALLFVAP
RERHLLKSIERTTRQPLTEMQLPTVEDVNAQRVAKFGDSITASLSSDNLALFRKLIEDYE
REHDVPLADIAAALAVQSRDGESFLMSPEPPAPPRAPREPRERPARRFDDCPPRQNRDGQ
ELATYRIAVGKRHKVVPGAIVGAIANEGGLRRSDFGHISIRPDHSLVELPADLSSETVEA
LRATRISGVLIQLQPDQGAPSGRPSRGGRDDRAGGKYGRPKGDRSSDRRRPRD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccgagcgtgacccgcagtccgacaacaatcccatcaccttcgccgacctc
gagatcgacgaacgtgtgctgaaggccctttccgacgtcggatacgagtcgccctcgcct
atccaggccgcgaccatcccgccgctgctcgccggcaaggacgtcgtgggtctcgcgcag
accggcaccggcaagaccgccgcgttcgcgatcccgatcctgtctcgcctggacgtggac
cggaaggtcccgcaggcgctcatcctggccccgacccgcgagctcgcgctgcaggtcgcg
gaggccttcgggaagtactcggcccacatcccgggtctgcacgtgctgccgatctacggt
ggtcaggcgtacggcgtgcagctgtcgggtctgcgtcgtggcgcccagatcatcgtcgga
actccgggtcgcgtcatcgaccacctggagaagggcacgctggacctgtcgaatctcgag
tacctcgtcctcgacgaggcggacgagatgctcaagatgggtttccaggacgacgtcgag
cgcatcctcgccgacaccccggagtacaagcaggtggcgctgttctcggcgaccatgccg
cccgcgatccgcaagatctccaagcagtacctgcacgatcccgtcgagatcaccgtcaag
tcgaagacggctaccgcgtcgaacatcacccagcggtgggtgcaggtggcgcaccagcgc
aagctcgacgcgctgacccggatcctcgaggtggagaccttcgaggcgatgatcatcttc
gttcggaccaagcaggccaccgaggacctggccgagcggctgcgggcgcgcggcttctcc
gccgccgcgatcaacggcgacatcgtccaggcacagcgtgagcgcacgatcgggcagctc
aagtccggtgccctggacatcctggtcgccaccgacgtcgcggcccgcggtctcgacgtc
gatcgcatctcgcacgtcgtgaactacgacatcccgcacgacaccgagtcctacgtgcac
cgcatcggtcgtaccggccgcgccgggcgcaccggtgacgcgctgctgttcgtggccccg
cgcgagcgtcacctgctcaagtcgatcgagcgcaccacgcggcagccgctcaccgagatg
cagctgcccaccgtcgaggacgtcaacgcgcagcgtgtcgcgaagttcggtgactccatc
accgcgagcctgagctccgacaacctggcactgttccgcaagctgatcgaggactacgag
cgtgagcacgacgtgccgctcgccgacatcgctgcggcgctggcggtccagtctcgggac
ggcgagtcgttcctcatgtcgcccgagccgccggctccgccgcgtgcaccgcgtgagccg
cgggagcggcccgcgcgccgcttcgacgactgtccgccgcgccagaaccgcgacggccag
gagttggccacctaccgcatcgcggtcggcaagcggcacaaggtggttcccggcgcgatc
gtcggcgccatcgccaacgagggcgggctgcgccgcagcgacttcgggcacatcagcatc
cggcccgaccacagcctggtcgaactcccggccgacctgtccagcgagacggtcgaggcg
ctgcgcgcgacgcgcatctcgggtgtgctgatccagctgcagcccgaccagggcgctccc
tccggtcggccctcgcgcggtggtcgtgacgaccgcgccggcggaaagtacggccgcccc
aagggcgatcggtcgtcggaccgtcgtcgcccgcgcgactga
DBGET
integrated database retrieval system
