Rhodococcus sp. W8901: HUN07_09520
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Entry
HUN07_09520 CDS
T11420
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rhwq Rhodococcus sp. W8901
Pathway
rhwq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhwq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HUN07_09520 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhwq03400
]
HUN07_09520 (recD)
Enzymes [BR:
rhwq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HUN07_09520 (recD)
DNA repair and recombination proteins [BR:
rhwq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HUN07_09520 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
RecD_N
NAT10_TcmA_helicase
UvrD-helicase
SH3_13
AAA_22
TraI_hel_assoc_N
SLFN-g3_helicase
AAA_16
SbcC_Walker_B
ResIII
DEAD
nSTAND3
AAA_24
DO-GTPase1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QKT10922
LinkDB
All DBs
Position
1994735..1996591
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AA seq
618 aa
AA seq
DB search
MIEARVAQRGKGVLREFNEAGVLEAADVHVALRLATLGGETSEPVHLATALAVRAVRSGS
VCLDLSRIREVTVDEGFEVDPAALPWPDDTVVMDGLRSSPLVIGGDAGPLRPLRLVESDE
GSLLYLDRYFRQEQAVRRILDERAHGHPAVDEDLLRAGLDELFRDHQDPSRPSDAPDRQR
IAAAVAATHRTSVIAGGPGTGKTHTVARVLALLERQQPGLRIGLAAPTGKAAARLQESVR
EQAEVVGLRADLSAMTLHRMLGWQRGTSRFRHNETNHLPYDVIVVDETSMVSLTMMCRLL
EAVRPEARLVLVGDPDQLTSVDAGAVLADLVARPVTGVENPVLARVVGADLSASDDPAEA
ALSVSERDRLRGGVIRLSRGRRFGGAIAQLAVAVRDGDEDRVLEILRSGEPDVSFVAPDE
LSALRSDVVTTSAAVTDAAQVGDAVAALRASEQHRLLCAHREGPFGASWWARNAMDWVGE
SIGGRLDAERWYAGQPLMVTANDHETRIYNGDTGVVVTGEDGELVAAFARGEEPYLLHLS
HLASVQTVYAMTIHRSQGSQYDTVSVILPGEESSLLTRELLYTAITRARTHVRIVGTEDA
VRAGVQRRVLRASGLRRG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggcgcgcgtcgcgcagcgcggcaagggtgtgctgcgcgagttcaacgaggcc
ggggtgctcgaggccgccgacgtgcatgtcgcgctgcggctcgcgacgctcggcggggag
accagcgagccggtgcacctggcgaccgcgctcgcggtgcgtgccgtgcgatcgggctcg
gtgtgcctggacctcagccggattcgggaggtgacggtcgacgagggtttcgaggtggac
ccggcggcgctgccgtggcccgacgacaccgtcgtgatggacgggctgcggtcgagcccg
ctggtgatcggcggggacgcgggtccgctgcgcccgctgcggctcgtggagtccgacgag
ggcagcctgctgtacctggaccggtacttccggcaggaacaggccgtgaggcgcatcctc
gacgagcgcgcccacgggcaccccgcggtggacgaggacctgctgcgcgccgggctggac
gagttgttccgggaccatcaggatccgtcccggccgtcggacgccccggatcggcagcgg
atcgcggccgccgtcgccgccacacaccggacgtcggtgatcgccggcgggcccggcacc
ggcaagacacacaccgtcgcgcgggtgctggcgctgctcgaacgccagcagcccggcctg
cggatcggactggccgcccccaccgggaaggccgcggcgcggctgcaggagtcggtgcgc
gagcaggccgaggtggtggggctgcgggccgacctgtcggcgatgacgctgcaccggatg
ctcggttggcagcgggggaccagccggttccggcacaacgagaccaaccacctgccctac
gacgtgatcgtggtggacgagacgtcgatggtgtcgctgacgatgatgtgccgactgctc
gaggccgtgcggcccgaggcgcggctggtgttggtcggcgacccggaccagctcacctcc
gtcgacgccggtgccgtgctcgccgacctggtggcccgcccggtgaccggggtcgagaac
ccggtgctggcgcgcgtggtcggcgcggacctgtcggcgtcggacgatcccgccgaggcg
gcgctgagtgtgtccgagcgggaccgactgcgcggcggcgtgattcggctcagccgggga
cggcggttcggtggcgcgatcgcgcagctggcggtcgcggtgcgcgacggcgacgaggac
cgggtgctcgagatcctgcgcagcggtgagccggacgtgtcgttcgtggcgcccgacgag
ctgtccgcgctgcgctccgacgtggtgacgacgtcggcggcggtgacggacgcggcccag
gtcggtgacgcggtggcggcgctgcgggcgtcggagcagcatcggctgctgtgcgcgcac
cgggagggcccgttcggcgcgtcgtggtgggcgcgcaacgcgatggattgggtcggggag
tcgatcggcggccggctcgacgccgaacgctggtacgccgggcagccgctgatggtgacc
gcgaacgaccacgagacccggatctacaacggcgacaccggagtcgtcgtcaccggcgag
gacggcgaactggtggcggcgttcgcgcgcggcgaggaaccgtacctgctgcacctgagc
catctggcgtcggtgcagacggtctacgcgatgacgatccaccgcagtcagggcagccag
tacgacaccgtctcggtgatcctgccgggggaggagtcgtcgctgctgacccgagagttg
ttgtacaccgccatcacccgagcccggacgcacgtgcggatcgtgggcaccgaggacgcc
gtccgcgccggcgtgcagcgtcgggtcctgcgggcgagcgggctgcggcgggggtga
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