Rhodococcus sp. W8901: HUN07_13125
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Entry
HUN07_13125 CDS
T11420
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rhwq Rhodococcus sp. W8901
Brite
KEGG Orthology (KO) [BR:
rhwq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rhwq03051
]
HUN07_13125 (pafA)
Enzymes [BR:
rhwq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
HUN07_13125 (pafA)
Proteasome [BR:
rhwq03051
]
Prokaryotic proteasome
Bacterial regulatory particles
HUN07_13125 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QKT14116
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All DBs
Position
2778586..2779929
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AA seq
447 aa
AA seq
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MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGSHPEYA
TAECDSLLQLVNHDRAGERVLEDLLVDAEQRLAEEGIGGDIYLFKNNTDSAGNSYGCHEN
FLVVRAGEFSRISDVLLPFLVTRQLICGAGKILQTPKAATFCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVGTAALVLEMIEAGVPFRDFAL
DNPIRAIREVSHDLTGRRPVRLAGGRQASALDIQREYYSRAVEHLQTRERDPQVDQVVDL
WGRALDAVENQDFAKVDTEIDWVIKRKLFQRYQDKYGMELADPKIAQLDLAYHDIKRGRG
VFDLLQRKGLAKRVTEDETIEAAVETPPQTTRAKLRGEFIAAAQDAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggaattgagaccgagttcggtgtcacctgcacctttcacggtcatagaaggctgagt
ccggacgaggttgctcgttacctcttccggcgagtggtttcgtggggccgtagttccaac
gtgttcctgcggaacggcgcacggctgtacctcgacgtcgggtcgcatccggagtacgcg
accgccgagtgcgacagcctgctgcaactcgtcaaccacgaccgcgccggtgagcgcgtg
ctcgaggatctgctcgtcgacgccgagcagcggctcgccgaagagggcatcggcggggac
atctacctgttcaagaacaacaccgattcggcggggaactcgtacggttgccacgagaat
ttcctcgtggtccgcgcgggggagttctcccgcatctccgacgtcctgctcccgttcctg
gtgacccgtcagttgatctgcggtgcgggcaagatcctgcagacgcccaaggcggcgacg
ttctgcctgtcgcagcgggcggagcacatctgggagggcgtctcgtccgcgacgacccgg
tcgcggccgatcatcaacacgcgcgacgagccccacgccgatgccgagaagtaccggcgt
ctgcacgtgatcgtcggcgattccaacatgtccgagaccacgaccatgctcaaggtcggg
accgcggcgttggtgctcgagatgatcgaggcgggcgttccgttccgtgacttcgctctc
gacaacccgatccgcgcgatccgtgaggtcagccacgacctgacgggtcgccgtccggtc
cggctggcgggtgggcgccaggccagtgcgctcgacatccagcgcgagtactactcgcgg
gccgtcgagcatctgcagacccgcgagcgggatccgcaggtggaccaggtggtcgacctg
tggggtcgggcgctcgacgccgtcgagaaccaggatttcgcgaaggtcgacaccgagatc
gactgggtgatcaagcgcaagctgttccagcgctaccaggacaagtacggcatggagctg
gccgatcccaagatcgcccaactcgacctggcgtatcacgacatcaagcgcggtcggggt
gtgttcgacctgttgcagcgcaaggggctggcgaagcgggtcaccgaggacgagaccatc
gaggccgcggtggagacgccgccgcagaccacccgcgcgaagctgcggggtgagttcatc
gccgccgcgcaggatgcgggccgcgacttcacggtggactgggtgcacctcaagctcaac
gatcaggcgcagcggacggtgctgtgcaaggacccgttccgttcggtcgacgagcgcgtg
gagcggctgatcgcgtccatgtga
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