Rhodococcus sp. W8901: HUN07_15990
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Entry
HUN07_15990 CDS
T11420
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rhwq Rhodococcus sp. W8901
Pathway
rhwq03030
DNA replication
rhwq03430
Mismatch repair
rhwq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhwq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUN07_15990 (dnaE)
03430 Mismatch repair
HUN07_15990 (dnaE)
03440 Homologous recombination
HUN07_15990 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhwq03032
]
HUN07_15990 (dnaE)
03400 DNA repair and recombination proteins [BR:
rhwq03400
]
HUN07_15990 (dnaE)
Enzymes [BR:
rhwq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUN07_15990 (dnaE)
DNA replication proteins [BR:
rhwq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUN07_15990 (dnaE)
DNA repair and recombination proteins [BR:
rhwq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUN07_15990 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
WHD_Storkhead
Motif
Other DBs
NCBI-ProteinID:
QKT12012
LinkDB
All DBs
Position
complement(3418432..3421968)
Genome browser
AA seq
1178 aa
AA seq
DB search
MADSFVHLHNHTEYSMLDGAAKVGPLFKEAERLGMTAVGMTDHGNMYGASEFYNVAKKHG
IKPIIGIEAYIAPESRFNTKRVLWGDRSQKSDDVSGSGAYTHMTMVAENATGLRNLFKLS
SLASIEGQLGKWPRMDEELIATHAEGIIATTGCPSGEIQTRLRLGHDREALEAAAKWQEI
WGKDNFFLELMDHGLSIERRVREGLLDIGKQLGIRPLATNDCHYVTKDAAENHEALLCIQ
TGKTLSDPTRFKFDGDGYYLKSAEEMRAIWDSEVPEACDSSLLIAERVQSYDDVWAHHDR
MPIFPVPDGHTQQTFLRHEVLRGLDRRFPGGPPQEYLERADYEIGVINEMGFPAYFLVVG
DLINHAREVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERVSMPDIDID
FDDRRRGEMVRYATEKWGSDKVAQVITFGTIKTKAAIKDSARVQFGQPGFAIADQITKAL
PPPIMAKDISVAGITDPEHERYKEAVEVRALIDSNPDVAKIYQTAKGLEGLIRNAGVHAC
AVIMSSEPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAIENIK
ANRGIDIDLDTLPIEDPATYELLARGDTLGVFQLDGSAMRDLLRRMQPTGFEDIVAVLAL
YRPGPMGMNAHNDYADRKNGRQEVKPIHPELEEPLKEILKDTFGLIVYQEQIMQIAQKVA
GYSLGQADILRRAMGKKKLSVLEEAYAGFREGMLKNEFSEPAIKALWDTILPFAGYAFNK
SHAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLSDCRKMGITVLPPDVNE
SEVNFASVGEDIRFGLGAVRNVGANVVASIIKARTEKSKFTDFSDYLGKIDALACSKKVT
ESLIKAGGFDSLEHPRKGLMLVHADAIDAVMGTKKAEAMGQFDLFGGDDADESVTSVFNV
KIPDEEWDTKHRLALEREMLGLYVSGHPLNGIEHVLASQSDTAIPTILEGDIKDGAQVTV
GGILASVNRRINKNGLTWASAQLEDLSGGIEVLFFPQAYSVYGMDVVEDSVVLVKARVSI
RDDRVSLIANDLAVPDLSAIGVAKPVAVSLPVRQCTKEKLGALKQVLTRHPGTSDVHVRL
IGSRGTSLWMVDEVLRVEPSSALMGDLKALLGPSCLAG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtggctgactcgttcgttcacctgcacaatcacaccgagtactcgatgctcgacggtgcg
gcaaaggtcggcccgctgttcaaggaggcggagcgcctcgggatgaccgcggtcggtatg
accgaccacggcaacatgtacggcgccagcgagttctacaacgtcgccaagaagcacggc
atcaagccgatcatcggcatcgaggcgtacatcgcgccggagtcgcggttcaacaccaag
cgcgtgctgtggggcgatcgcagccagaagtccgacgacgtttcgggttcgggcgcctac
acgcacatgacgatggtcgccgagaacgcgaccgggctgcggaacctgttcaagctgtcg
tccctcgcgtcgatcgagggtcagctcggcaagtggccgcgcatggacgaggaactcatc
gccacgcacgccgagggcatcatcgccacgaccggctgcccgtcgggtgagatccagacc
cgcctgcgcctcggccacgaccgggaggcgctcgaggccgccgcgaagtggcaggagatc
tggggcaaggacaacttcttcctcgaactcatggaccacggcctgtcgatcgagcgccgc
gtccgtgagggcctgctcgatatcggcaagcagttgggcatccgcccgctcgccaccaac
gactgccactacgtgaccaaggacgcggccgagaaccacgaggctctgctgtgcatccag
accggcaagacgctatcggacccgacgcgcttcaagttcgacggtgacgggtactacctc
aagtcggccgaggagatgcgcgcgatctgggactccgaggtcccggaggcgtgtgacagc
tcgctgctcatcgccgagcgggtgcagtcgtacgacgacgtgtgggcccaccacgaccgg
atgccgatcttcccggtcccggacgggcacacccagcagacgttcctgcgtcacgaggtg
ctgcgcggactcgaccgtcgcttccccggcggtccgccgcaggagtacctcgagcgcgcc
gactacgagatcggcgtcatcaacgagatgggcttcccggcctacttcctcgtcgtcggc
gacctgatcaaccatgcgcgcgaggtcggcatccgcgtcggccccggtcgaggctcggcg
gccggttcgctcgtcgcgtacgcgatgggcatcaccaacatcgaccccattccgcacggc
ctgctgttcgagcggttcctcaaccccgagcgcgtgtcgatgcccgatatcgatatcgac
ttcgacgaccgtcgccgcggcgagatggtgcgttacgccaccgagaagtggggcagcgac
aaggtcgcccaggtcatcacgttcggcaccatcaagaccaaggccgccatcaaggactcc
gcgcgagtccagttcgggcagcccggtttcgcgatcgccgatcagatcaccaaggcgctg
ccgccgccgatcatggcgaaggacatctcggtcgcgggcatcaccgatcccgagcacgag
cgctacaaggaggccgtcgaggtccgcgcgctcatcgactccaacccggacgtcgcgaag
atctaccagaccgcgaagggcctcgagggcctgatccgcaacgccggcgtgcacgcctgc
gcggtcatcatgtcctccgagccgctcaccgacgcgatcccggtgtggaagcgcgcgcag
gacggcgcgatcatcaccggctgggactacccgtcgtgcgaggccatcggcctgctgaag
atggacttcctcggtctgcgcaacctcaccgtcatcggtgacgcgatcgagaacatcaag
gccaaccgcggcatcgacatcgatctcgacacgctgcccatcgaggacccggccacgtac
gagttgctcgcgcgtggtgacaccctcggtgtcttccagctcgacggcagtgcgatgcgg
gatctgctgcggcgcatgcagcccaccggcttcgaggacatcgtcgcggtgctggcgctg
tatcgcccgggtccgatgggcatgaacgcgcacaacgactacgccgaccgcaagaacggg
cggcaggaagtcaagccgatccacccggagctcgaggagccgctcaaggagatcctcaag
gacaccttcggcctgatcgtctaccaggagcagatcatgcagatcgctcagaaggtggcc
ggctactcgctgggacaggcagacattctccgtcgagccatgggtaagaagaagctctcg
gtgctggaggaggcctacgccggcttccgcgaggggatgctcaagaacgagttctccgag
cctgcgatcaaggcgctgtgggacacgatcctcccgttcgccggctacgcgttcaacaag
tcgcacgccgccggctacggcctggtgtcgttctggacggcgtacctcaaggcgaactat
ccggccgagtacatggccggtctgctcacgtccgtcggcgacgacaaggacaaggcggcg
gtgtacctgtcggattgccggaagatgggcatcacggtgctaccgccggacgtcaacgag
tccgaggtcaacttcgcttcggtcggtgaggacatccggttcggcctcggtgcggtccgc
aacgtcggcgcgaatgtcgtggcgtcgatcatcaaggcgcgcaccgagaagtcgaagttc
accgacttctccgactacctcgggaagatcgacgcgctggcctgttccaagaaggtcacc
gaatcactcatcaaggcaggcggattcgactcgctcgagcatccgcgcaagggtctgatg
ctggtgcacgccgacgcgatcgacgcggtgatgggcaccaagaaggccgaggcgatgggg
cagttcgacctgttcggtggcgacgacgcggacgagtcggtgacgtcggtcttcaacgtg
aagattcccgacgaggagtgggacaccaagcaccggctcgcgctcgagcgcgagatgctt
ggcctgtacgtctccgggcatccgctcaacggcatcgaacacgtcctcgcctcgcagtcg
gacacggcgatcccgaccatcctcgagggcgacatcaaggacggcgcccaggtcaccgtc
ggcggcatcctcgcgtcggtcaaccggcggatcaacaagaacggactgacgtgggcgtcc
gcgcagctcgaggacctctccggtggtatcgaggtgttgttcttcccgcaggcgtactcg
gtgtacgggatggatgtggtcgaggactcggtggtgctcgtcaaggcgcgcgtgtcgatc
cgggacgaccgcgtctcgctgatcgcgaacgaccttgcggtgccggacctttcggctatc
ggtgtcgcgaagccggtcgcggtgagcctgccggtgcggcagtgcaccaaggagaagctc
ggtgccctcaagcaggtgctgacgcgtcaccccggtacgtccgacgtccatgtgcggttg
atcggcagtcgcggcacgtcgctgtggatggtggacgaggtccttcgggtggagccgtcg
tcggcgctgatgggcgatctcaaggcgttgctcgggccgagttgcctcgccggctga
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integrated database retrieval system
