Rhodococcus sp. W8901: HUN07_16965
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Entry
HUN07_16965 CDS
T11420
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhwq Rhodococcus sp. W8901
Pathway
rhwq03030
DNA replication
rhwq03430
Mismatch repair
rhwq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhwq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUN07_16965
03430 Mismatch repair
HUN07_16965
03440 Homologous recombination
HUN07_16965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhwq03032
]
HUN07_16965
03400 DNA repair and recombination proteins [BR:
rhwq03400
]
HUN07_16965
Enzymes [BR:
rhwq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUN07_16965
DNA replication proteins [BR:
rhwq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUN07_16965
DNA repair and recombination proteins [BR:
rhwq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUN07_16965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QKT12173
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All DBs
Position
3624366..3625052
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AA seq
228 aa
AA seq
DB search
MKNWTTRPICAFDLETTGRDPLSARIVTACVVTVEGGRPRSRNWIVDPGVDIPEDASSIH
GISTAHAREHGTDYAVGYREIRQALTDAWAAGYAVVAFNASYDLTVMDAEGRRLGLPPMD
DYGLVVDPYVIDREVDRYRRGKRTLGALCEHYGIELGSAHEAESDALAAAELAQILPQRF
PELAALDDVMTSQAGWHAERQRDFAEYLQREGRDASDVDGQWPIRLAA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaactggaccacccgaccgatctgcgcgttcgatctggaaacaactggccgagac
ccgctctcggcgcgaatcgtcaccgcatgcgtggtcaccgtcgagggtgggcggccccgg
tcacgcaactggatcgtcgatccgggtgtcgacatccccgaggacgccagctccatccac
ggcatctcgacggcccacgcgcgcgagcacggcacggattacgcagtcgggtaccgggag
atccggcaggccctcaccgacgcgtgggcggccggctacgccgtcgtcgcgttcaacgcc
tcgtacgacctcaccgtgatggacgccgagggccgccgcctcggtctgccaccgatggac
gactacgggctcgtcgtcgacccgtacgtgatcgatcgggaggtcgaccgctaccgccgc
ggcaagcgcacgctgggcgcgctgtgcgagcactacgggatcgagttggggtcggcgcac
gaggcggagtccgacgccctcgctgccgccgaactggcgcagatcctgccgcagcggttc
cccgaactcgccgcgctcgacgacgtgatgacgagtcaggcaggctggcatgccgagcgc
cagcgcgacttcgccgagtacctgcagcgcgagggccgcgacgcgtcggacgtcgacggg
cagtggccgatccggctcgcggcctga
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