Rhodococcus sp. W8901: HUN07_18140
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Entry
HUN07_18140 CDS
T11420
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rhwq Rhodococcus sp. W8901
Brite
KEGG Orthology (KO) [BR:
rhwq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhwq03032
]
HUN07_18140
03036 Chromosome and associated proteins [BR:
rhwq03036
]
HUN07_18140
03400 DNA repair and recombination proteins [BR:
rhwq03400
]
HUN07_18140
DNA replication proteins [BR:
rhwq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HUN07_18140
Chromosome and associated proteins [BR:
rhwq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HUN07_18140
DNA repair and recombination proteins [BR:
rhwq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HUN07_18140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QKT12367
LinkDB
All DBs
Position
complement(3884566..3885297)
Genome browser
AA seq
243 aa
AA seq
DB search
MNKAELIDVLTEKLGSDRRTATEAVEHVVDTIVRAVHSGESVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKALIAGGQKLPASGPAVKRGAAEPVKKAAKKTAAK
KTAAKKTVAKKTAAKAPAKTVAKKTAAKAPAKTVAKKTAAKAPAKTVAKKTVAKKTAAKA
PAKTVAKKTVAKKTAAKAPAKTVAKKTVAKKTAAKAPAKTVAKKTVAKKTAAKKAPAKRT
ARK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagctcatcgatgttctgaccgagaaactgggttcggacaggcgtacc
gccaccgaggccgtcgagcatgtcgtcgacaccatcgtgcgcgccgtgcactccggtgag
agcgtcaccatcaccggattcggagttttcgagcagcgtcgccgtgcggcccgcgtcgca
cgcaacccgcgcaccggtgagacggtcaaggtcaagccgacctcggttccggctttccgt
ccgggtgcgcagttcaaggcgctcattgccggtggccagaagcttccggcttcgggtccg
gcggtcaagcgtggcgctgctgagccggtgaagaaggcggccaagaagaccgcggccaag
aagaccgcagccaagaagaccgtggcgaagaagactgcggccaaggctccggccaagacc
gtggcgaagaagactgcggccaaggctccggccaagaccgtggcgaagaagactgcggcc
aaggctccggccaagaccgtcgccaagaagaccgtggcgaagaagactgcggccaaggct
ccggccaagaccgtcgccaagaagaccgtggcgaagaagactgcggccaaggctccggcc
aagaccgtcgccaagaagaccgtggcgaagaagactgcggccaaggctccggccaagacc
gtcgccaagaagactgtcgcgaagaagactgcggccaagaaggctccggccaagcgcact
gcgcgtaagtga
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