Rhodococcus sp. W8901: HUN07_20065
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Entry
HUN07_20065 CDS
T11420
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhwq Rhodococcus sp. W8901
Pathway
rhwq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhwq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUN07_20065 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhwq03019
]
HUN07_20065 (groL)
03110 Chaperones and folding catalysts [BR:
rhwq03110
]
HUN07_20065 (groL)
03029 Mitochondrial biogenesis [BR:
rhwq03029
]
HUN07_20065 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhwq04147
]
HUN07_20065 (groL)
Enzymes [BR:
rhwq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HUN07_20065 (groL)
Messenger RNA biogenesis [BR:
rhwq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HUN07_20065 (groL)
Chaperones and folding catalysts [BR:
rhwq03110
]
Heat shock proteins
HSP60 / Chaperonin
HUN07_20065 (groL)
Mitochondrial biogenesis [BR:
rhwq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HUN07_20065 (groL)
Exosome [BR:
rhwq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HUN07_20065 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HUN07_20065 (groL)
Exosomal proteins of breast cancer cells
HUN07_20065 (groL)
Exosomal proteins of colorectal cancer cells
HUN07_20065 (groL)
Exosomal proteins of bladder cancer cells
HUN07_20065 (groL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Packaging_FI
Motif
Other DBs
NCBI-ProteinID:
QKT12690
LinkDB
All DBs
Position
complement(4287773..4289386)
Genome browser
AA seq
537 aa
AA seq
DB search
MSKQIEFNEKARRALERGVDQLADAVKVTLGPRGRHVVLAKAFGGPTVTNDGVSIAREIE
LEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQALVKAGLKNVAAGANPIGLGIGIS
KAADAVSEALLAAATPVEGKEAIAQVATVSSRDAEIGELVGEAMTRVGVDGVVTVEESST
LHTELAVTEGVQFDKGYLSPYFVTDIDAQRAVLEDALVLMYRDKITSLPDFLPLLEKIAE
SGKPVLIIAEDIEGEVLSTLVVNAIRKTLKAVAVKAPFFGDRRKAFLEDLAVVTAGTVIN
TDMGITLKEAGLDLLGTARRVVVTKDETTIVDGAGTEADIATRVAQLKREIENTDSDWDR
EKLEERLAKLAGGVAVIKVGAATETDLKERKFRVEDAVNAAKAAVEEGIVPGGGSAIVQA
GQVLTDLAASLSGDEATGVEVVRTALRAPLFWIATNAGVDGSVVVSKVSEAPKGHGFNAA
TLTYGDLLADGVVDPVKVTRSAVVNAASVARMVLTTESAVVEKPTEEAADAGHGHAH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcaaattgagttcaacgagaaggcccggcgcgcgctcgagcgtggcgtcgac
cagctcgccgacgccgtcaaggtcaccctcggcccgcgcggtcggcacgtcgtgctcgcc
aaggcattcggcggccccaccgtcaccaacgacggtgtgagcatcgcccgcgagatcgag
ctcgaggacccgttcgagaacctcggcgcacagctcgtcaagagcgtcgccaccaagacc
aacgacgtcgcgggcgacggcaccaccaccgccaccgttctcgcgcaggcgctggtgaag
gccggcctgaagaacgttgccgcgggagccaacccgatcggcctcggaatcggcatcagc
aaggccgccgacgccgtgtcggaggcgctgctcgcggccgccaccccggtcgagggcaag
gaggccatcgcacaggtcgccaccgtgtcgtcgcgtgacgcggagatcggcgagctggtc
ggcgaggccatgacccgagtcggcgtcgacggtgtcgtcacggtcgaggagtcctcgacc
ctgcacaccgagctcgccgtcaccgagggcgtccagttcgacaagggctacctgtcgccg
tacttcgtcaccgacatcgacgcccagcgcgccgttctcgaggacgcgctggtgctgatg
taccgcgacaagatcacctcgctgccggacttcctgccgctgctcgagaagatcgccgag
tccggcaagccggtcctcatcatcgccgaggacatcgagggcgaggtgctctccacgctc
gtcgtcaacgcgatccgcaagacgctcaaggccgtcgccgtcaaggcgccgttcttcggt
gaccgtcgcaaggccttcctcgaggacctcgccgtcgtcaccgccggcaccgtgatcaac
acggacatgggcatcacgctcaaggaagccggtctcgacctgctcggcacggcacgccgc
gtcgtcgtcaccaaggacgagaccactatcgtcgacggtgccggcaccgaggccgacatc
gccacccgcgtcgcgcagctcaagcgcgagatcgagaacaccgactccgactgggaccgc
gagaagctcgaagagcgcctcgcgaagctggccggcggcgtcgccgtcatcaaggtcggc
gcagccaccgagacggacctcaaggagcgcaagttccgcgtcgaggatgccgtcaacgct
gccaaggctgcggtcgaggagggcatcgtccccggtggcggctccgccatcgtgcaggcc
ggtcaggtcctcaccgacctggctgcgtcgctctcgggtgacgaggccaccggtgtcgag
gtcgtgcgcaccgcgctgcgcgctccgctgttctggatcgccaccaacgcaggcgtcgac
ggttccgtcgtggtcagcaaggtgtccgaggcgcccaagggccacggcttcaacgccgcg
accctcacctacggcgacctgctcgccgacggtgtcgtcgacccggtcaaggtgacgcgt
tcggctgtcgtcaacgcggcatccgtcgcgcgcatggtgctcaccaccgagagcgccgtc
gtcgagaagcccaccgaggaagcagcggacgccggccacggccacgctcactga
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