Rhodococcus sp. W8901: HUN07_20980
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Entry
HUN07_20980 CDS
T11420
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rhwq Rhodococcus sp. W8901
Pathway
rhwq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhwq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HUN07_20980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhwq03021
]
HUN07_20980
03400 DNA repair and recombination proteins [BR:
rhwq03400
]
HUN07_20980
Enzymes [BR:
rhwq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HUN07_20980
Transcription machinery [BR:
rhwq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HUN07_20980
DNA repair and recombination proteins [BR:
rhwq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HUN07_20980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QKT12861
LinkDB
All DBs
Position
complement(4508415..4512374)
Genome browser
AA seq
1319 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRNWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVIVGVDEELRHNELSTLEAEMEVEKKTVADQRDADLEARAQKLEAD
IAELEAEGAKSDVRRKVKDGGEREMRQLRDRAQRELDRLDEIWTTFTKLSVKQLIVDEGL
YRELVDRYGEYFTGAMGAESIQILMRNFDIQAEAESLRETIRSGKGQKKLRALKRLKVVA
AFQMSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVINEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLFHLTREVEGATGEYQ
PATTDQAEQGVYSSPSEAQMAVDRGVLSVQAKIKVRLTHQRPSREAEAELFPEGWSYGDA
WTTETTLGRVMFNDLLPADYPFVNEQMPKKRQATIINDLAERYPMIVVAQTVDKLKDTGF
YWATRSGVTVSISDVLVPPEKPQIMEQFEAQADQIEKKYQRGALNHAERNSALVKIWSEA
TDEVGKAMEAHFPDDNPIPMIVKSGAAGNMTQVRSLAGMKGLVTNPKGEFIPRPIKSSFK
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREVDCGTERGIITHI
AEKQADGAIIRDAHVETSTYARTLAADAVDENGNVVVERGHDLGDPAIDALLAAGITQVK
VRSVLTCTTATGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGAA
GAADITGGLPRVQELFEARVPKGKAPIADVTGRVQLEDGDRFYKITIVPDDGGEEVVYDK
LSKRQRLRVFKHDDGSERLLADGDHVDVGQQLMEGAADPHEVLRVMGPRQVQIHLVNEVQ
EVYRSQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLVERAEFEASNRRVVAEGGE
PAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLIGLKENVIIGKLIP
AGTGINRYRNIQVQPTEEARAAAYAVPSYDDQYYSPEGFGTGTGAAVPLDDYGFGTDYR
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgaactccgcatcggtctggcgaccgcggaggacatc
cgcaactggtcctacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggtaagtacaagcgtgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgcgcgaaggtgcgccgtgagcgcatgggccacatcgagcttgccgctccg
gtgacccacatctggtacttcaagggtgttccgagccgtctcggttacctgctggacctg
gctccgaaggatctcgagaagatcatctacttcgctgcctacgtcatcgtcggtgtcgac
gaggagctgcgtcacaacgagctctccacgctcgaggccgagatggaggtcgagaagaag
accgtcgccgaccagcgggacgccgacctggaggcccgcgcgcagaagctcgaggccgac
atcgccgagctcgaggccgagggtgccaagtccgacgtgcgccgcaaggtcaaggacggc
ggcgagcgcgagatgcgtcagctccgtgaccgcgcgcagcgcgagctggaccgcctcgac
gagatctggaccacgttcaccaagctgagcgtcaagcagctcatcgtggacgagggcctg
tatcgcgagctggtcgaccgctacggcgagtacttcacgggcgcgatgggcgcagagtcc
atccagatcctgatgcgcaacttcgacatccaggccgaggcggagtctctgcgcgagacc
atccgcagcggcaagggccagaagaagctgcgtgcgctcaagcgactcaaggtcgtcgcg
gcgttccagatgtccggcaactcgcccatgggcatggtgctcgacgctgtcccggttatc
ccgccggagctgcgtccgatggttcagctcgacggtggccgtttcgcgacgtccgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcgactgatcgacctc
ggtgcccccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtggacgcg
ctgttcgacaacggtcgtcgtggccggcccgtcacgggtccaggcaaccgtccgctgaag
tcgctgtccgatctgctcaagggcaagcagggccgcttccgtcagaacctgctcggtaag
cgcgtcgactactccggccgttcagtcatcgtcgtcggtccgcagctcaagctgcaccag
tgtggtctgccgaagctgatggcgctcgagctgttcaagccgttcgtcatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagtccgcgaagcgcatggtcgagcgtcagcgc
ccgcaggtgtgggatgtcctcgaagaggtcatcaacgagcaccccgtgctgctcaaccgt
gcacctacgctgcaccgtctgggtatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccagctgcacccgctggtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggcagtccacctgccgctgtcggcggaggcacaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgtcgcccgcgtcgggtcgcccgctcgccatgccgcgtctggac
atggtgaccggtctgttccacctgacccgcgaggtcgagggtgcgaccggcgagtaccag
ccggccaccaccgatcaggcggagcagggcgtgtactcgtcgccgtccgaggctcagatg
gccgtcgatcgtggcgtgctgtccgtgcaggcgaagatcaaggtgcgtctgacgcatcag
cgtccgtcgcgcgaggccgaggcggagctgttccccgagggctggagctacggcgacgcc
tggaccaccgagacgactctcggccgcgtcatgttcaacgatctgctgccggcggactac
ccgttcgtcaacgagcagatgccgaagaagcgtcaggcgacgatcatcaacgatctcgcc
gagcgctacccgatgatcgtggtcgcgcagaccgtcgacaagctcaaggacaccggcttc
tactgggccacccgttccggcgtgacggtctcgatctccgacgtcctcgtgccgccggag
aagccccagatcatggagcagttcgaggcgcaggccgatcagatcgagaagaagtaccag
cgcggtgctctcaaccacgccgagcgcaacagcgctctcgtgaagatctggtccgaggcc
accgacgaggtcggtaaggccatggaggcgcacttccccgacgacaacccgatcccgatg
atcgtgaagtccggcgcggccggcaacatgactcaggttcgctcgctcgccggtatgaag
ggcctggtgacgaacccgaagggtgagttcatcccgcgtccgatcaagtcttccttcaag
gagggcctgacggttctcgagtacttcatcaacacgcacggtgctcgtaagggtctggcc
gataccgcgctccgtaccgccgactcgggttacctgacccgtcgtctggtggacgtctcg
caggacgtcatcgtccgcgaggtcgactgtggcaccgagcgcggcatcatcacgcacatc
gccgagaagcaggccgacggcgcgatcatccgcgatgcgcacgtcgagacctcgacgtac
gcccgcaccctcgccgcggacgcggtcgacgagaacggcaacgtcgtcgtcgagcgtggc
cacgacctgggcgatccggcgatcgacgcgctgctcgcggcaggcatcacgcaggtcaag
gttcgctcggtgctcacctgcaccacggcgaccggcgtctgcgccacctgctacggccgc
tcgatggcgaccggcaagctcgtcgacatcggcgaggccgtcggtatcgtcgccgcgcag
tcgatcggtgagcccggtacccagctgaccatgcgtacgttccaccagggtggtgcggcg
ggcgccgccgacatcaccggtggtctgccgcgtgtccaggagctgttcgaggctcgtgtc
ccgaagggcaaggcgcccatcgcggacgtcaccggtcgggtgcagctcgaggacggcgat
cgcttctacaagatcaccatcgttccggacgacggtggcgaagaggttgtctacgacaag
ctctcgaagcgtcagcgtctgcgcgtgttcaagcacgacgacggcagcgagcgtctgctg
gcggacggcgaccacgtggacgtcggacagcagctcatggaaggtgctgccgacccgcac
gaggtgctgcgtgtcatgggcccccgtcaggtgcagatccacctcgtcaacgaggtccag
gaggtgtaccggagccagggtgtgtcgatccacgacaagcacatcgaggtcatcgtgcgc
cagatgctgcgtcgcgtcacgatcatcgactcgggtgcgacggagttcctgccgggctcg
ctcgtcgagcgcgcggagttcgaggcgtccaaccgtcgcgtcgtcgccgagggtggcgag
cccgcggccggccgtccggtgctgatgggtatcaccaaggcatcgctggcgaccgactcg
tggctgtccgccgcgtcgttccaggagaccactcgcgtgctgaccgatgcggccatcaac
tgccgctcggacaagctgatcggtctgaaggagaacgtgatcatcggcaagctgatcccg
gccggcaccggcatcaaccggtaccggaacatccaggttcagcccaccgaagaggcacgg
gctgccgcctacgcggttccgtcgtacgacgatcagtactacagccccgaaggcttcggc
accgggactggcgctgctgttccgctggacgactacggtttcggcaccgactaccgctag
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integrated database retrieval system
