Rhodococcus sp. WAY2: GFS60_01605
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Entry
GFS60_01605 CDS
T11412
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhwy Rhodococcus sp. WAY2
Pathway
rhwy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhwy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFS60_01605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhwy03019
]
GFS60_01605
03110 Chaperones and folding catalysts [BR:
rhwy03110
]
GFS60_01605
03029 Mitochondrial biogenesis [BR:
rhwy03029
]
GFS60_01605
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhwy04147
]
GFS60_01605
Enzymes [BR:
rhwy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GFS60_01605
Messenger RNA biogenesis [BR:
rhwy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GFS60_01605
Chaperones and folding catalysts [BR:
rhwy03110
]
Heat shock proteins
HSP60 / Chaperonin
GFS60_01605
Mitochondrial biogenesis [BR:
rhwy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GFS60_01605
Exosome [BR:
rhwy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GFS60_01605
Exosomal proteins of other body fluids (saliva and urine)
GFS60_01605
Exosomal proteins of breast cancer cells
GFS60_01605
Exosomal proteins of colorectal cancer cells
GFS60_01605
Exosomal proteins of bladder cancer cells
GFS60_01605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QHE68088
LinkDB
All DBs
Position
1651882..1653507
Genome browser
AA seq
541 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIE
KAVEAVTARLLETAKEIDTKEQIAATAGISAGDPSIGELIAEAMDKVGKEGVITVEESNT
FGLQLELTEGMRFDKGYISAYFATDAERQEAVLEDAYILLVSSKISTVKDLLPLLEKVIQ
SGKPLVIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAQLADIAILTGGEVIS
EEVGLSLETAGLELLGQARKVVITKDETTIVEGAGDSDAIAGRVSQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQS
APALDDLKLEGDEATGANIVRVALEAPLKQIAFNAGLEPGVVAEKVRNLPAGHGLNAANN
EYGDLLEAGINDPVKVTRSALQNAASIAALFLTTEAVVADKPEKAGAPAGDPTGGMGGMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaagaggcccgtcgcggcctcgagcgaggactcaac
gccctcgccgacgcagtcaaggtgacgttgggccccaagggtcgcaacgtcgtgctcgag
aagaagtggggagctcccacgatcaccaacgacggcgtttccatcgccaaggagatcgag
ctcgaggacccctacgagaagatcggtgccgagctggtcaaggaggtcgccaagaagacg
gacgacgtcgccggcgacggaaccaccaccgcaaccgtgctcgctcaggctctcgtgcgt
gagggcctccgcaacgttgctgccggcgccaacccgctcggcctcaagcgcggcatcgag
aaggccgtcgaggccgtcaccgcgcgtctgctcgagaccgccaaggagatcgacaccaag
gagcagatcgctgctaccgctggtatctccgccggcgacccgtccatcggtgagctcatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcacggtcgaggagtccaacacc
ttcggcctgcagctcgagctcaccgagggcatgcgcttcgacaagggctacatctcggcg
tacttcgccaccgatgcagagcgtcaggaagccgtcctcgaggacgcgtacatcctgctc
gtgagctccaagatctccaccgtcaaggacctgctgccgctgctggagaaggtcatccag
tcgggcaagccgctggtcatcatcgcggaggacgtcgagggcgaagccctgtccaccctg
gtggtcaacaagattcgtggcaccttcaagtccgtggccgtcaaggcccccggcttcggg
gaccgccgcaaggcgcagctcgccgacatcgccatcctcaccggtggcgaggtcatcagc
gaagaggtcggcctctccctggagaccgccggactcgagctcctcggccaggcccgcaag
gtcgtcatcaccaaggacgagaccaccatcgtcgagggtgccggcgattccgacgctatc
gccggtcgcgtgagccagatccgcgccgagatcgaaaacagcgacagcgactacgaccgc
gagaagctgcaggagcgcctggccaagctggccggtggcgttgcagtcatcaaggccggt
gccgccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaagatgccgtgcgtaac
gccaaggctgccgtcgaagagggcatcgttgccggtggtggcgtggcgctgctgcagtcg
gcccccgcgctcgacgacctcaagctcgaaggtgacgaggccaccggtgcgaacatcgtt
cgcgtcgccctcgaagctccgctgaagcagatcgccttcaacgccggcctcgagcccggc
gtcgtcgccgagaaggtccgcaacctgcccgcaggtcacggcctcaacgctgcgaacaac
gagtacggcgacctgctcgaagcaggcatcaacgacccggtcaaggtcacccgctccgcg
ctgcagaacgcagcgtcgatcgcggctctgttcctcaccaccgaggccgtcgtcgccgac
aagccggagaaggccggagcgcccgcgggcgacccgaccggcggcatgggcggcatggac
ttctga
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