Rhodococcus sp. WAY2: GFS60_05248
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Entry
GFS60_05248 CDS
T11412
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rhwy Rhodococcus sp. WAY2
Pathway
rhwy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhwy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFS60_05248 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhwy03019
]
GFS60_05248 (cshA)
03009 Ribosome biogenesis [BR:
rhwy03009
]
GFS60_05248 (cshA)
Enzymes [BR:
rhwy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GFS60_05248 (cshA)
Messenger RNA biogenesis [BR:
rhwy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GFS60_05248 (cshA)
Ribosome biogenesis [BR:
rhwy03009
]
Prokaryotic type
rRNA helicases
GFS60_05248 (cshA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QHE71637
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Position
5621074..5622837
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AA seq
587 aa
AA seq
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MSDIEREPEPPTFADLDIDDRVLKALSDVGYESPSPIQAATIPPLLAGNDVVGLAQTGTG
KTAAFAVPILSRIDLTQKSPQALVLAPTRELALQVAEAFGKYATHIPGLHVLPIYGGQSY
GVQLSGLRRGAHVVVGTPGRVIDHLEKGTLDLSKLSYLVLDEADEMLKMGFQEDVERILS
DTPEQKQVALFSATMPGAIRKISKQYLHDPIEITVKSKTSTASNISQRYVQVAHQRKLDA
LTRVLEVESFEAMIIFVRTKQATEDLAERLRARGFSAAAINGDIVQAQRERTIGQLKSGA
LDILVATDVAARGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRAGEALLFVAPRERH
LLKAIEKATRQPLAEMQLPSVDDVNAQRVAKFGDSITESLTSDNLALFRKMIEDYEQEHD
VPLADIAAALAVQSRDGDAFLMSPEPPPPPRREREPREPRERPARRFDDGPPTRSRGPEG
QELATYRIAVGKRHRVVPGAIVGAIANEGGLRRSDFGHISIRPDHSLVELPADLSRETLE
ALRRTRISGVLIQLQPDSGPPSGRPARGDRDAGKFQRDRDSRRKPRE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatatcgaacgtgaacccgaaccgcccacttttgccgacctcgacatcgatgat
cgggtcttgaaggcactgtccgatgtgggctacgagtcgccctcgccgatccaggcagcc
accatcccgcctctgctcgcaggtaacgacgtcgtcggactggcccagaccggtaccggc
aaaactgccgcgttcgcggttccgatcctctcccggatcgacctcacccagaagtcgccg
caggccctggtgctcgcaccgacgcgtgagctggctctgcaggtcgcggaggcgttcggt
aagtacgcgacccatattccgggtcttcatgtgctgccgatctacggcggccagagctac
ggcgtccagttgtccgggctgcgccgcggcgcccacgtcgtcgtcggcacgcccggccgg
gtcatcgaccacctggaaaagggcacgctcgacctgtccaagctgtcgtacctcgtcctc
gacgaggccgacgagatgctgaagatgggcttccaggaggacgtcgaacggatcctgtcc
gatacgccggaacagaaacaggtggcgttgttctcggccaccatgccgggcgcgatccgc
aaaatttccaagcagtatctgcacgatcccatcgagatcacggtgaagtcgaagacgtcc
accgcgtccaacatctcgcagcggtacgtgcaggtggcgcatcagcgcaagctcgacgcc
ctcactcgtgttctcgaggtggagtcgttcgaggccatgatcatcttcgtgcgcaccaag
caggccacggaagatctcgccgaacgcctgcgcgcccgtgggttctcggctgccgcgatc
aacggcgacatcgtgcaggcgcagcgtgaacgaaccatcggccagctcaagagtggtgct
ctcgacatccttgtcgccaccgacgtcgctgcccgcggtctcgatgtcgaccgcatctct
cacgtggtcaactacgacatcccgcacgacacggagtcctacgtgcaccgcatcggccgt
accggtcgagcaggacgcgcgggcgaggctctgttgttcgtcgcaccccgggaacggcac
ctcctcaaggcgatcgagaaggcaacacgccagccgctggcagagatgcagcttccgagc
gtcgacgacgtcaacgcgcagcgcgtcgcgaagttcggcgactccatcaccgagagcctc
acctccgacaaccttgcgttgttccgcaagatgatcgaggactacgagcaggagcacgac
gtgccgctcgccgacatcgcagcagcgctcgcggtgcagtcgcgcgacggtgatgcattc
ctgatgtcacccgaaccgccgcctccgccgcgtcgcgagcgtgaaccgcgcgaaccccgg
gagcgtccggcccgtcgattcgacgacggcccgcccacccggtcgcggggcccggagggt
caggaactcgccacctatcgcatcgcggtggggaagcggcatcgtgtggtgcccggcgcc
atcgtgggtgccatcgccaacgagggtgggctgcggcgcagcgatttcgggcacatcagc
atccgtcccgatcacagcctggtggaactacccgcagacctgtcccgggagacgctcgag
gccctgcggcgcacccgcatctccggtgtgctgatccagcttcagcccgactccggccca
ccgtcgggaaggcctgcccggggcgaccgcgacgccggcaagttccagcgtgaccgcgac
agcagaagaaagccgcgcgagtag
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