Rhodococcus sp. WAY2: GFS60_05828
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Entry
GFS60_05828 CDS
T11412
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rhwy Rhodococcus sp. WAY2
Pathway
rhwy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhwy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFS60_05828 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhwy03019
]
GFS60_05828 (pnp)
03016 Transfer RNA biogenesis [BR:
rhwy03016
]
GFS60_05828 (pnp)
Enzymes [BR:
rhwy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GFS60_05828 (pnp)
Messenger RNA biogenesis [BR:
rhwy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GFS60_05828 (pnp)
Transfer RNA biogenesis [BR:
rhwy03016
]
Prokaryotic type
tRNA degradation factors
GFS60_05828 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
S1_RRP5
KH_KhpA-B
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
QHE72197
LinkDB
All DBs
Position
6248639..6250912
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AA seq
757 aa
AA seq
DB search
MTENSAVEIDEGVFESTAVIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDETMLLSATS
ASKHPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVD
GLRNEIQVVVTVMSLNPQDLYDVVAINAASASTQIAGLPFSGPVGGVRVALITSAENKAG
QWVAFPTVEQLENAVFDMVVAGRIVSGSGDDADVAIMMVEAEATDNVISLIADGAQAPTE
AIVAEGLEAAKPFIARLCTAQQQLAAKASKPTGEFPVFPAYQDDVFAAVEEAAAEKLSAA
LTIAGKQERDDKTDEVKVEVLEQVAPKFEGREKELGAAFRSLTKKLVRQRILRDQFRIDG
RGITDIRSLSAEVALVPRAHGSALFERGETQILGVTTLDMVKMAQQVDSLGPETTKRYMH
HYNFPPYSTGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALSSNGST
SMGSVCASTLALLNAGVPLKAPVAGIAMGLVSDQVDGETRYVALTDILGAEDAFGDMDFK
VAGTKDFVTALQLDTKLDGIPSKVLAGALSQAKDARATILDVMAEAIDTPDEMSPFAPRV
TAIKVPVDKIGEVIGPKGKMINSITEQTGANISIEDDGTVFVGATDGPSAQAAIDMINAI
ANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGSGKRIAKVEDVVSVGSKL
RVEIADIDNRGKISLIPVEEDGAAPATEQDEEQAAEK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaactccgcagtagagatcgatgagggcgtgttcgaatccaccgccgtgatc
gacaacgggtccttcggcacccgcaccattcgattcgagaccggccgcctcgctcagcag
gccgccggcgccgtcgtcgcctacctcgacgacgagaccatgttgctgtcggccaccagc
gccagcaagcaccccaaagagcacttcgacttcttccccctgacggtggacgtcgaggag
cggatgtacgcggccggtcgcattcccggctcgttcttccgccgtgagggccgtccctcc
accgacgccatcctcacttgccgcctgatcgaccgtccgctgcgcccgtcgttcgtcgac
ggcctgcgtaacgagatccaggtcgtcgtcacggtgatgagcctcaacccgcaggacctc
tacgacgtggtcgccatcaacgcggcgtcggcgtccacccagatcgccggcctgccgttc
tccggtcctgtcggtggtgtgcgtgtagcgctcatcacctcggcggagaacaaggccggc
cagtgggtggcattcccgacggtcgagcagctcgagaacgcagtcttcgacatggtcgtt
gccggccgcatcgtctccggttccggtgacgacgccgatgtcgcgatcatgatggtcgag
gcggaggccaccgacaacgtgatctccctgatcgcggatggcgctcaggcaccgaccgag
gcgatcgtggccgagggcctcgaggcggccaagccgttcatcgcgcggctgtgcaccgct
cagcagcagctcgcggcgaaggcgtcgaagcccaccggcgagttccccgtcttcccggcg
taccaggacgacgtgttcgccgcggtcgaagaggccgccgccgagaagctgagtgccgca
ctcaccattgccggcaagcaggagcgcgacgacaagaccgacgaggtcaaggtcgaggtg
ctcgagcaggttgcacccaagttcgagggacgtgagaaggaactcggcgcagcgttccgt
tcgctgaccaagaagctggtacgtcagcgcatcctgcgcgaccagttccgcatcgacggt
cgtggaatcacggacatccgttcgctctccgccgaggtcgccctcgtgccgcgggcacac
ggttccgcgctgttcgagcgtggcgaaacccagatcctgggcgtcaccaccctcgacatg
gtgaagatggcgcagcaggtcgacagcctcgggcccgagaccaccaagcggtacatgcac
cactacaacttcccgccgtactccaccggagagaccggtcgtgtcggttcgccgaagcgc
cgcgagatcgggcacggcgcgctggccgagcgggcactcatgcctgtactgccgagcgtc
gaggagttcccctacgccatccgccaggtgtcggaggccctcagctccaacggttccact
tcgatgggttcggtgtgtgcgtcgacgctcgcgctgctcaacgccggtgtgccgctgaag
gctccggttgccggtatcgccatgggtctggtgtccgaccaggtcgacggggagacccgc
tacgtggccctcaccgacatcctcggtgccgaagacgctttcggtgacatggacttcaag
gtcgcgggcaccaaggacttcgtgacggccctccagctcgacacgaagctcgacggcatc
ccgtcgaaggtcctcgccggcgcgttgtcgcaggccaaggatgcgcgtgcgacgatcctc
gacgtcatggccgaggccatcgacactccggacgaaatgagcccgttcgctccgcgggtg
acggccatcaaggtgcccgtcgacaagatcggcgaggtcatcggccccaagggcaagatg
atcaactcgatcaccgagcagaccggcgccaacatctccatcgaagatgacggcaccgtg
ttcgtcggtgcgacggacggcccgtccgcgcaggccgcgatcgacatgatcaacgccatc
gccaacccgcagctgccgaaggtcggcgagcgcttcctgggcacggtcgtcaagaccacc
gccttcggtgcgttcgtgtcgctcctccccggccgcgacgggctggtgcacatctcgaag
ctgggctccggcaagcgcattgccaaggtcgaggacgtcgtgagcgtcggctccaagttg
agggtcgagatcgccgacatcgacaaccgcggcaagatctcgctgatcccggtcgaggag
gacggcgctgcgccggccaccgagcaggacgaagagcaggcagccgagaagtag
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