Rhodococcus sp. WAY2: GFS60_05841
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Entry
GFS60_05841 CDS
T11412
Symbol
rnjA
Name
(GenBank) Ribonuclease J2 (endoribonuclease in RNA processing)
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
rhwy Rhodococcus sp. WAY2
Pathway
rhwy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhwy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFS60_05841 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhwy03019
]
GFS60_05841 (rnjA)
Messenger RNA biogenesis [BR:
rhwy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GFS60_05841 (rnjA)
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Other DBs
NCBI-ProteinID:
QHE72210
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Position
6261039..6262844
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AA seq
601 aa
AA seq
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MKAASTKTGATGKSPSRSRRGGNGNKRPDNRAATPDPTARLGAPPKAPFKGLRVVALGGI
GEIGRNMTVFEHQGKLLIVDCGVLFPEDQQPGVDLILPDFRHIEDRMADVEAVVLTHGHE
DHIGAIPFLLRLRPDLPVIGSRFTLALVAAKCREHRQRPNLVEVTEGQRTAHGPFECEYF
AVNHSIPDAIAVAIRTDAGVVLHTGDIKLDQLPLDGRLTDLAGFSRLGDEGVDLFLVDST
NAEVPGFVTPEREIGGVLDNVIGKAKQRVIVASFASHVHRIQQVVDVAHRYNRRVAFVGR
SMVRNMQIAQDLGYLSVPDGLVVDIDTAANLPDDRLVLISTGSQGEPLSALSRMARGEHR
QINVRANDLVVLASSLIPGNENSVFAVVNGLAKRGATVVTQQSAKVHVSGHASAGELLYL
YNAVRPTNAMPVHGEWRHLRANAALAKATGVPEERIVLAEDGVVVDMVDGLAEIVGQVPV
GHVYVDGLSVGDVGDSTLSDRLVLGEGGFIAINVVIDDHTGRAVSTPEVSGRGFSDDPTA
LKDAAQLVEAELARLATEGINDAHRIAQAIRRVVGKWVADKYRRRPMIVPTVIAVPSFDG
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggctgcatccaccaagacgggcgccaccggcaagtcgccctcgcgctctcgtcgc
ggtggcaacggcaacaagcgtccggacaaccgggcggcaactcccgatccgaccgcgcgg
ctcggtgcaccgcccaaggcgcccttcaagggactgcgcgtggtcgccctcgggggcatc
ggtgaaatcggccggaacatgaccgtcttcgagcatcagggcaaactgctcatcgtcgac
tgcggcgtgctgtttcccgaggatcagcagcctggtgtcgatctgatcctgccggacttc
cggcacatcgaggatcgcatggccgatgtcgaggccgtcgtcctcacccacggtcacgag
gatcacatcggcgcgatcccattcctgctccgcctccggccggatctgccggtcatcggc
tcccgatttacgctcgcgctcgtcgcagccaagtgccgggaacatcgtcagcgacccaac
ctcgtcgaggtgacggaaggccagcgcacggcacacggcccgttcgagtgtgagtacttc
gcggtcaaccactccatcccggacgcgatcgcggtcgccatcaggacggacgccggagtc
gtgctgcacaccggtgacatcaaactcgaccagcttccgctcgacggcaggctcaccgac
cttgccggcttctcgcgtctcggcgacgaaggcgtggacctgttcctagtcgactcgacc
aacgccgaggtgccgggattcgtcacaccggaacgtgagatcggcggcgtgctcgacaac
gtcatcggtaaggcgaagcaacgtgtgatcgtggcgtcgttcgccagccacgtccaccgc
atccagcaggtcgtcgacgtggcgcaccgctacaaccgcagggttgcgttcgtgggccgg
tccatggtccgcaacatgcagatcgcacaggatctcggctacctgagcgtgcccgacggt
ctggtggtcgacatcgacaccgcggcgaacctgcccgacgatcgcctcgttctcatctcc
accggctctcagggtgaaccgctgtcggcgttgtcgcggatggcgcgcggtgaacaccgg
cagatcaatgtccgggccaacgacctggtggtcctcgcctcgtcactgattccgggcaac
gagaattccgtcttcgcggtggtgaacggtctcgccaagcgcggtgccaccgtggtcacg
cagcagagcgccaaggtgcacgtctccggtcacgcgtcggcgggtgagctgctctacctg
tacaacgcggtccggcccaccaatgccatgccggtgcacggcgaatggcggcacctgcgc
gccaacgccgcgctggccaaggccaccggcgttccggaagaacgcatcgtgctcgccgag
gacggcgtggtggtcgacatggtggacggtctcgccgaaatcgtcgggcaggtgccggta
ggacacgtctacgtcgacggactgtccgtcggtgatgtcggcgactccacgctgtcggat
cgattggttctcggggagggcgggttcattgcgatcaacgtggtgatcgacgaccacacc
ggccgcgccgtcagcaccccggaggtgtccgggcgcggattctccgacgacccgaccgcc
ctcaaggatgccgctcagctggtcgaggcggaactcgcgcgcctggccacggagggcatc
aacgacgcgcatcggatcgctcaggcgatccggcgggtggtgggtaagtgggttgcggac
aagtaccgtcgccggccgatgatcgtgcccaccgtgatcgcggtgccgtcgttcgacggc
aaatag
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