Rhodococcus sp. WAY2: GFS60_05920
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Entry
GFS60_05920 CDS
T11412
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
rhwy Rhodococcus sp. WAY2
Brite
KEGG Orthology (KO) [BR:
rhwy00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GFS60_05920 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhwy03021
]
GFS60_05920 (rpoD)
Transcription machinery [BR:
rhwy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GFS60_05920 (rpoD)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QHE72287
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Position
complement(6341646..6343022)
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AA seq
458 aa
AA seq
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MAATDTRQTADSTSESGPEAPVAQAADGTASAVEEAPAKKAPAKKAPAKKAAAKKAPAKK
AAAKKAGGKKATSGKAGDGEDGPDEDVADIEDIDITEGDLAEVESDVVEVVAVGEEDEAE
EPSDKDKASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELA
KRIEAGLYATQIMQELADAGEKLPAAQRRDMSWICRDGNRAKNHLLEANLRLVVSLAKRY
TGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPV
HMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDE
GDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLD
EIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccaccgatacacgtcagactgctgattcgacttcagagtcaggaccggaagca
ccagtcgcacaggccgccgacggaactgcttcggcagtcgaggaagctcccgcgaaaaag
gctccggccaagaaggctcccgccaagaaagcggcggcaaagaaggctcctgcgaagaag
gcagcagcaaagaaggcgggcggcaagaaggccacgtccggcaaggccggcgacggtgag
gacggccccgacgaggatgtcgcggacatcgaggacatcgacatcaccgagggcgacctc
gcggaggtcgagtccgatgtcgtcgaggtcgttgcagtcggcgaggaggacgaagccgaa
gagccgtccgacaaggacaaggcatccggcgacttcgtgtgggacgaggaagagtcggag
gcgctccggcaggcccgcaaggacgccgaactgacggcctcggccgactcggtccgtgcc
tacctcaagcagatcggcaaggtcgccctcctgaacgccgaggaggaggtggaactcgcc
aagcggatcgaggcgggcttgtacgccacgcagatcatgcaggagctcgccgacgcgggc
gagaagcttcccgccgcccagcgtcgcgacatgagctggatctgccgtgacggcaaccgc
gccaaaaatcacctgctcgaggcgaaccttcgcctcgtggtgtcgttggccaagcgctac
accggccgcggcatggctttcctcgacctcatccaggaaggcaacctgggcctcatccgt
gcagtcgagaagttcgactacaccaagggctacaagttctcgacctacgcaacgtggtgg
atccgacaggccatcacccgcgccatggctgaccaagcacgcaccatccgtatcccggtg
cacatggtcgaggtcatcaacaagctcggccgcatccagcgtgaactgctccaggacctg
ggtcgcgaacccactcccgaagagctcgcgaaggaaatggacatcacgccggagaaggtg
ctggaaatccagcagtacgcccgtgagcccatctccctcgaccagaccatcggcgacgag
ggcgacagccagctcggtgacttcatcgaggactccgaagctgtcgtggccgtcgacgcc
gtgtcgttcacgttgttgcaggaccagctgcagtcggtactcgagacgctgtccgagcgc
gaagcaggtgtcgtccgcctccggttcggactcaccgacgggcagccgcgcacgctcgac
gagatcggacaggtgtacggcgtcacgcgcgagcgcatccgtcagatcgaatccaagacg
atgtcgaagctgcggcacccgtcccggtcccaggtgctgcgcgactacctggactag
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