Rhodococcus sp. WAY2: GFS60_07188
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Entry
GFS60_07188 CDS
T11412
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhwy Rhodococcus sp. WAY2
Pathway
rhwy03030
DNA replication
rhwy03430
Mismatch repair
rhwy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhwy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFS60_07188
03430 Mismatch repair
GFS60_07188
03440 Homologous recombination
GFS60_07188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhwy03032
]
GFS60_07188
03400 DNA repair and recombination proteins [BR:
rhwy03400
]
GFS60_07188
Enzymes [BR:
rhwy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFS60_07188
DNA replication proteins [BR:
rhwy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFS60_07188
DNA repair and recombination proteins [BR:
rhwy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFS60_07188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
TPR_4
Motif
Other DBs
NCBI-ProteinID:
QHE73528
LinkDB
All DBs
Position
pRWAY01:891827..892501
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AA seq
224 aa
AA seq
DB search
MSEGAVTMATMTAPESPAPSPRVGQVPHALSPRQWAQQMLRPGRAVVCDVESTDFDGAIL
EIAVIDAATGVVLLDTLVDPGAVPIHPAAAAVHGIDADQLVGAPDWAAVHPELVAVTAGK
VTLAYNAEFDMGRILHDCHRYGLDPEHLADPQVWGCIMLARSQAEGVEKSIRLGAAHRAR
GDAEAARRVLQGIADGISHRPVEPQPTPSDRPEGAVELAQRVAR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagggtgcggtcacgatggccaccatgaccgcgcccgagtcaccagcgccgagc
ccgcgagtggggcaggtgccgcatgcgctcagtccccgccagtgggcgcagcagatgctg
cggcccggccgggcggtggtctgcgatgtcgaatccaccgacttcgacggcgcgatcctc
gaaatcgccgtgatcgacgccgccaccggggtcgtgctcctcgacaccctcgtcgatccg
ggcgccgtaccgatccacccggccgccgccgcggtgcacgggatcgacgccgaccaactg
gtcggcgcccccgactgggcggcggtccatcccgagttggtggcggtgacggcgggaaag
gtgacgctggcgtacaacgccgagttcgatatgggccggatcctgcacgactgccaccgg
tacgggctcgacccggagcacctcgccgacccgcaggtgtgggggtgcatcatgctggcc
cgctcccaggccgaaggggtcgagaagagcatccggctcggcgccgcccaccgggcgcgc
ggcgacgccgaagccgcccgtcgtgttttgcagggcatcgcggacggaatcagccaccgc
ccagtcgaaccccagcccacgccctccgaccgtcctgagggtgctgtcgagctggcgcag
cgggtggcccggtga
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