Rhizobium sp. N731: AMK02_CH00117
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Entry
AMK02_CH00117 CDS
T04809
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhx
Rhizobium sp. N731
Brite
KEGG Orthology (KO) [BR:
rhx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhx03016
]
AMK02_CH00117 (truB)
Enzymes [BR:
rhx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AMK02_CH00117 (truB)
Transfer RNA biogenesis [BR:
rhx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AMK02_CH00117 (truB)
Prokaryotic type
AMK02_CH00117 (truB)
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Zf-C2H2_ZNF451_5th
Motif
Other DBs
NCBI-ProteinID:
ANK83776
LinkDB
All DBs
Position
complement(125774..126706)
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AA seq
310 aa
AA seq
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MSKPRKPKGRPISGWLILDKPVDFGSTEAVSKIKWLYKAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVSWGEERATDDLEGEVTESSDERPSEQHIRDILPKYIGSI
SQVPPQFSAIKIAGERAYDLARDGEAVEIPSREVEIFRLTLLACPDANTAHFEVECGKGT
YVRALARDFGRELGCYGHISGLRRTFVAPFSEEAMVPLANLVALESIEDIDERLAALDAL
LIDTCEALSALPHLVINDDQAHRLKMGNPILVRGRDAPIAESEAYATARGRLIAIGEIGQ
GEFRPKRVFA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgcaaacccaagggccggccgatttccggctggctgattctcgacaag
ccggtggatttcggctcgacggaagccgtttccaagatcaagtggctctacaaggcgcag
aaggccggccatgccggcacgctcgatccgctggcctccggcatgctgccgatcgcgctc
ggcgatgcgaccaagaccgttccctatgtgatggacggccgcaagatctatgaattcacg
gtgagctggggcgaggagcgcgccaccgacgatctcgaaggcgaggtcactgagagttcg
gacgagcgcccgagcgaacagcacatccgcgacatcctgcccaaatatatcggcagcatc
agccaggtgccgccgcagttttccgccatcaagatagcgggagaacgcgcctatgacctg
gcgcgcgatggcgaagccgtggagatcccctcgcgcgaagtggagatcttccggctgacc
ctgcttgcctgcccggacgccaataccgcacatttcgaagtggaatgcggcaagggcacc
tatgtcagagcgctcgcccgcgatttcggccgtgagctcggctgctatggccatatatcc
gggctgcggcgcaccttcgtcgcgcccttttcggaagaggccatggtgccgctcgcaaac
ctcgtggcgctggaatcgatcgaggatattgatgagcggctcgccgcccttgatgcgctc
ctgatcgacacctgcgaagcattgtcggccctgccccatctcgtcatcaacgacgaccag
gcgcaccggctgaagatgggcaatccgatcctggtgcgcggccgcgatgcgccgattgcc
gaaagcgaagcctatgcgacggcacgcggcaggctgatcgcgatcggcgaaatcggccag
ggcgagtttcgaccgaagcgggttttcgcctga
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