Rhizobium sp. N731: AMK02_CH00422
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Entry
AMK02_CH00422 CDS
T04809
Symbol
rpoN-1
Name
(GenBank) RNA polymerase sigma-54 factor RpoN 1
KO
K03092
RNA polymerase sigma-54 factor
Organism
rhx
Rhizobium sp. N731
Pathway
rhx02020
Two-component system
rhx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rhx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AMK02_CH00422 (rpoN-1)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AMK02_CH00422 (rpoN-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhx03021
]
AMK02_CH00422 (rpoN-1)
Transcription machinery [BR:
rhx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMK02_CH00422 (rpoN-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
PP_kinase_C
Motif
Other DBs
NCBI-ProteinID:
ANK84071
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All DBs
Position
423438..424997
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AA seq
519 aa
AA seq
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MALSANLFLRQSQSLVMTPQLMQSIQLLQMTHFELTQFIAQEVEKNPLLEFPSNDGEAGD
ERPAGEDEQFGHSPEDAGSDDGADNRAEALSSDWYDNGGSESSSRLNDELDANYTNVFPD
DGGPQRLDAPELVGQWKSMPGSADGADYDLDDFVAGQVSLRDHLAQQIPFVLRDMSDRLI
AQNFIDQLDDAGYIQVDLVETGERLGTSLTQVEHVLAALQTLDPPGVFARSLAECLAIQL
RQKDRYDPAMQALVENLELLARRDFATLKRLCGVDEEDLLDMLGEIRQLNPKPGSGFETG
VSEAIMPDVVVRPSAEGGWLVELNPDTLPRVLVNQSYFSRVTRNGEDHAFLSECLQSANW
LTRSLDQRAKTIMKVASEIVRQQDAFLLHGVDHLRPLNLKTVAEAIKMHESTVSRVTSNK
YMLTPRGLFELKYFFTVSIGAVEGGDSHSAEAVRHKIRALIMQESPDAVLSDDDIVDMLK
KGGIDLARRTVAKYREAMNIASSVQRRREKRALAKVAGF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtccgccaatctatttctgcgccagagccagtccctggtcatgacgccgcaa
ctgatgcaatccatccagttgctgcagatgacccatttcgagctcactcagttcatcgct
caggaagtggagaagaacccgctgctcgaatttccgtcgaatgacggcgaggcgggcgac
gaacggccggcaggcgaggacgagcagttcggtcattcgccggaggacgccggctcggac
gatggcgccgacaatcgtgccgaggcgctgtcgagtgactggtacgacaatggcggcagc
gaaagcagcagccggctgaacgacgagctcgacgccaattacaccaatgtctttcccgat
gacggtggtccgcagcgcctcgacgcaccggaactcgtcggtcagtggaagtcgatgccg
ggcagcgccgacggcgccgattacgatctcgacgattttgtcgccggccaggtgtcgctg
cgcgatcatctcgctcagcagatccccttcgtgctgcgcgatatgagcgaccggctgatc
gcgcagaattttatcgatcagctcgacgatgccggttacatccaggtcgatctggtcgag
accggcgagcggctcggcaccagtctcacgcaggtcgaacacgtgctcgccgccctccag
acgcttgatccgccgggtgtttttgcccgcagcctcgccgaatgcctggcgatccagctc
aggcagaaggaccgttacgaccctgccatgcaggcgctggtcgaaaatctcgagctcctg
gcccggcgcgacttcgccacgctgaagcggctctgtggcgttgacgaggaagatcttctc
gacatgctcggcgagatccgccagctcaatccgaagcccggcagcggtttcgagacgggt
gtttccgaagcgatcatgcccgatgtcgtcgtcaggccctccgcggagggtggctggctg
gtcgagctcaatccggatacgctgccgcgcgtgcttgttaatcagtcctatttttcccgc
gtgacccggaacggcgaggatcatgccttcctttccgagtgcctgcagagcgccaactgg
ctgacccgcagcctcgaccagcgggcaaagaccatcatgaaggtggcaagcgagatcgtc
cgccagcaggacgccttcctgctgcacggtgtcgaccatttgcggccgctgaacctgaaa
acggtggccgaggcgatcaagatgcatgaatccaccgtcagccgcgtcacctcgaacaaa
tatatgctgacgccgcgcggcctcttcgaactcaaatatttcttcaccgtgtcgatcggc
gcggtcgagggcggcgacagccattcggccgaggccgtgcgccacaagatccgcgcgctg
atcatgcaggagagccccgacgcggtgctctccgatgacgatatcgtcgacatgctgaag
aagggcggcatcgatctcgcccgccgcacggtcgcgaaataccgggaagcgatgaacatc
gcttcctcggtccagcgccgccgcgagaaacgggcgctcgccaaggtcgcgggcttctga
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