Rhizobium sp. N731: AMK02_CH00495
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Entry
AMK02_CH00495 CDS
T04809
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhx
Rhizobium sp. N731
Pathway
rhx00061
Fatty acid biosynthesis
rhx00071
Fatty acid degradation
rhx01100
Metabolic pathways
rhx01212
Fatty acid metabolism
rhx02024
Quorum sensing
rhx04146
Peroxisome
Module
rhx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AMK02_CH00495 (fadD)
00071 Fatty acid degradation
AMK02_CH00495 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AMK02_CH00495 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMK02_CH00495 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhx01004
]
AMK02_CH00495 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhx04147
]
AMK02_CH00495 (fadD)
Enzymes [BR:
rhx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AMK02_CH00495 (fadD)
Lipid biosynthesis proteins [BR:
rhx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AMK02_CH00495 (fadD)
Exosome [BR:
rhx04147
]
Exosomal proteins
Exosomal proteins of breast milk
AMK02_CH00495 (fadD)
Exosomal proteins of breast cancer cells
AMK02_CH00495 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ANK84140
LinkDB
All DBs
Position
complement(494149..495849)
Genome browser
AA seq
566 aa
AA seq
DB search
MSSISVHPNGAKADKPWLATYPEMVPAELPPLEHVSLAELLEKSCARYADRTVFSSMGKA
VSYRELEDQTRKVAAWLQSIGLEKGDRVAVMMPNVLQNPVATYAILRAGFVVVNVNPLYT
PRELEHQLRDSGAKAIFVLENFARTVEQVLNKTDLRHVVVTSLGEMLGPRGLIVNFVVRK
VKKLVPSWSIPQHKSFSQVLREGAKKNLQPVTLAGGDVAFLQYTGGTTGVAKGAVLTHQN
LLANKLQLSLWLRSAFQRKKQPEVLNFLCALPLYHIFALTVNSLMGMSLGAHNILIANPR
DIPGLVKEFEKSDVHIFPGLNTLFNALMNNAEFAKLDFSSLIMSLGGGMAVQRPVAERWL
KMTGTAITEGYGLSETSPVATANRFDSIEFTGSIGLPLPSTELDIRDEEGRPLPLGEIGE
ICIRGPQVMAGYWQKPEETARVMTADGYFRSGDMGFMDERGYTKIVDRKKDMILVSGFNV
YPNEIEEVAAMHAGILEAAAIGVPDGHSGEAVKLFVVRKDPNLTEAEVKAHCIANLTNYK
RPRFIEFRTELPKSPVGKILRKDLRG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatttccgtccatccgaacggagcaaaagccgacaagccctggcttgccacc
tatcccgaaatggttccggccgaactcccgccgctggaacatgtctctcttgccgaactc
ctggaaaagtcctgcgcccgttacgccgaccggacggttttttccagcatgggcaaggcg
gtgagctaccgcgagctggaggaccagacgcgcaaggtcgccgcctggctgcagagcatc
gggctcgagaagggcgaccgcgtcgcggtgatgatgccgaacgtcctgcagaatccggtc
gcgacctatgccatcctcagagccggcttcgtcgtcgtcaacgtcaatccgctctatacg
ccgcgtgagctcgaacaccagctgcgcgattccggcgccaaggcgatcttcgtgctggag
aatttcgcccgcacggtcgagcaggtcctgaacaagaccgacctgcgccacgtcgtcgtc
acctcgcttggcgaaatgctggggccgagggggctgatcgtcaatttcgtcgtgcgtaag
gtgaagaagctcgttccctcctggtcgatcccgcagcataagagcttcagccaagtactg
cgcgaaggcgcgaagaagaacctccagccggtgacgctagccggcggcgacgtcgccttc
ctgcaatataccggcggcacaacaggcgttgccaagggtgcggtgctgacccatcagaac
ctgctcgccaacaagctgcagctgtcgctctggctgcgatcggctttccagcgcaagaaa
caacccgaggttctgaacttcctctgcgcgctgccgctctaccacatcttcgcgctgacg
gtgaattcgctgatgggcatgtcgctcggcgcccacaatatcctgatcgccaatccgcgc
gacattcccgggctggtcaaggaattcgaaaagtccgatgtgcatatcttcccgggcctc
aacacgctgttcaacgcactgatgaacaatgccgaattcgccaagctcgacttctcctcg
ctgatcatgtcgctcggcggcggcatggccgtccagcgcccggtcgccgaacgctggctg
aagatgaccggcacggcaattaccgagggttacggcctttccgagacctcgcccgtcgcc
accgccaaccgcttcgattccatcgagttcaccggttcgatcggcctgccgctgccctcc
accgaactcgacatccgcgacgaggagggccggccgctgccgctcggcgaaatcggcgag
atctgcatccgcggaccgcaggtgatggccggctattggcagaagccggaggaaacggcg
cgggtgatgaccgcggacggctatttccgctccggcgacatgggcttcatggacgaacgc
ggctacaccaagatcgtcgaccgcaagaaggacatgatcctggtttcgggcttcaacgtc
tatccgaacgagatcgaggaagtcgccgccatgcatgccggcattctcgaagccgcggcg
atcggcgtgccggacgggcattcgggcgaagcggtcaaactcttcgtcgtcagaaaggat
ccgaacctgacggaggcggaggtgaaggcccattgcatcgccaatctcaccaattacaaa
cgcccgcgcttcatcgaattccgcaccgaactgccgaaatcccccgtcggcaagatcctg
cgcaaggacctgcgcggctga
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