Rhizobium sp. N731: AMK02_CH00607
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Entry
AMK02_CH00607 CDS
T04809
Name
(GenBank) DNA helicase UvrD-like protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhx
Rhizobium sp. N731
Pathway
rhx03420
Nucleotide excision repair
rhx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMK02_CH00607
03430 Mismatch repair
AMK02_CH00607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhx03400
]
AMK02_CH00607
Enzymes [BR:
rhx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMK02_CH00607
DNA repair and recombination proteins [BR:
rhx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMK02_CH00607
MMR (mismatch excision repair)
Other MMR factors
AMK02_CH00607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
ANK84249
LinkDB
All DBs
Position
complement(612209..614269)
Genome browser
AA seq
686 aa
AA seq
DB search
MYLEKLNPQQRMAVEHGTLTDGSHIAGPLLVIAGAGSGKTNTLAHRVAHLIVKGADPRRI
LLMTFSRRAAAEMARRVERICRDVLGSNAGVMAEALAWSGTFHGIGARLLRDYAQQIGLD
ADFTIHDREDSADLINLIRHDLGFSKTESRFPAKGTCLAIYSRAVNSETALDQVLRDAFP
WCAAWEKQLRELFACYVEAKQSQNVLDYDDLLLYWAQMVGESVIAEDIGSRFDHVLVDEY
QDTNRLQASILMALKPQGQGLTVVGDDAQSIYSFRAATVRNILDFPAAFSPPANIVTLDR
NYRSTQPILTAANAVIDLASERFTKNLWTERQSSERPRLVTVRDEAEQARYVADKVLDNR
EEGLKLKQQAVLFRASHHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAALRFAQNP
RDRVAGFRLMQILPGVGPSTAQKALDLMSEDASPLSALAAMPAPPRSGEDWTDFVSMLQE
MKSGKAGWPAEIELARQWYAPHLERLHEDAATRQADLLQLEQIAGGYASRERFLTELTLD
PPDATSDQAGVPLLDEDYLILSTIHSAKGQEWTRVFMLNVVDGCIPSDLAVGATAEIEEE
RRLLYVAMTRARDGLDLVVPQRFFTYGQNAQGDRHVYASRSRFIPATLLQFFEACSWPQV
KSDAAAQAQARQVRIDVGARMRGMWR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcgaaaagctcaatccgcagcagcgcatggccgtcgagcacggcacgctcacc
gacggcagccatattgccgggccgctgctggttattgccggcgccggttccggcaagacg
aataccttggcgcatcgggtcgcccatctgatcgtcaagggcgccgacccccgccgcatc
ctgctgatgaccttctcgcgccgggcggcggccgaaatggcgcggcgcgtcgagcgcatc
tgccgcgacgtgctcggttcgaatgccggcgtcatggccgaggcgcttgcctggtccggc
actttccacggcatcggcgccaggctgctgcgcgactatgcccagcagatcggcctcgat
gccgatttcaccatccatgaccgcgaagacagcgccgacctgatcaacctgatccggcac
gatctcggcttctccaagacggaaagccggttcccggccaagggcacctgccttgccatt
tattcgagggcggtgaattcggagacggcgctcgaccaggtgctgcgcgacgcctttccc
tggtgcgcggcgtgggaaaaacagctgcgcgagcttttcgcctgctatgtcgaggccaaa
cagagccagaatgtgctcgattacgacgaccttctgctctactgggcgcagatggtcggc
gagagcgtgattgcagaggatatcggcagccgcttcgaccatgtgctggtcgacgaatat
caggacaccaaccggctgcaggcctcgatcctgatggcgctgaagccccaaggccagggc
ctgaccgtcgtcggcgacgatgcgcagtcgatctattccttccgcgcagcgacagtgcgc
aacatcctcgattttcccgcagccttcagcccgcccgccaatatcgtcacgctcgaccgc
aactatcgctcgacgcagccgatcctgacagccgccaatgccgtcatcgatctcgcctcg
gagcgcttcaccaaaaatctctggaccgagcggcaatcctccgagcggccgcgcctcgtg
acggtgcgcgacgaggccgagcaggcgcgttacgtcgccgacaaggtgctcgacaaccgc
gaggaaggcctcaagctcaagcagcaggcggtgctgtttcgcgcctcacatcacagcggg
ccgctggaggtcgagctgacccggcgcaacattcccttcgtcaagttcggcgggctgaag
tttctcgacagcgcccatgtcaaggacatgctggccgcccttcgcttcgcgcaaaatccg
cgcgaccgggtggcgggcttccggctgatgcagatcctgccgggcgtcggcccctcgacg
gcccagaaggcgctcgacctgatgtccgaggatgcgagcccgctgtcggcgcttgccgcc
atgccggcgccgccgcgctccggcgaggattggactgatttcgtttcgatgctgcaggag
atgaaatccggcaaggccggctggccggcggaaatcgagctggcgcggcaatggtacgcg
ccgcatctggaacggctgcatgaggacgccgcgacgcggcaagccgatctcttacagctc
gagcagattgccggcggttatgcctcgcgcgagcgtttcctcaccgaactcaccctcgat
ccgccggatgcgacgagcgaccaggccggcgtgccgctgctcgacgaggattatctcatt
ctctcgaccatccactcggccaagggccaggagtggacgagggtcttcatgctgaatgtc
gtcgacggctgcattccgagcgatcttgccgtcggcgccaccgccgaaatcgaggaagaa
cgccggctgctctatgtggcgatgacgcgcgcccgcgacggtctcgacctcgtcgtgccg
cagcgcttcttcacctacgggcagaatgcgcagggcgaccgccacgtctatgcctcgcgc
agccgcttcattccggcgaccctgctgcaattcttcgaggcctgcagctggccgcaggtg
aaatcggatgccgccgcgcaagcccaggcgcggcaggtgcgcatcgatgtcggcgcccgt
atgcgcggcatgtggcggtaa
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