Rhizobium sp. N731: AMK02_CH00653
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Entry
AMK02_CH00653 CDS
T04809
Name
(GenBank) ATP-dependent DNA helicase Ku-type protein
KO
K10979
DNA end-binding protein Ku
Organism
rhx
Rhizobium sp. N731
Pathway
rhx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rhx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AMK02_CH00653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhx03400
]
AMK02_CH00653
DNA repair and recombination proteins [BR:
rhx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AMK02_CH00653
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Ku
DnaA_N
Motif
Other DBs
NCBI-ProteinID:
ANK84293
LinkDB
All DBs
Position
652018..652821
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AA seq
267 aa
AA seq
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MARQTFWKGYLKLSLVTASVSLTPATTESNKVRFHVLNRQTKNRVESRYVDSVTHKPVTD
RDQVKGYPRGEDDYVLLEDEEIEEVGLESTRTIDIDSFVPRGSIDWIWYDKPHFLAPEDK
VGVEAFCVIREAMKANDVVGIARLVLYRRERAVLLEPQGKGIVLWTLRYGDEVREPSAEI
DDKAEIDSKLLTLMKRLVKEETRDWSPTMVQDPIQKRLKSMIRGKQKSLKKAAPAKEPAP
VKSTGNVINIMDALKKSLASESGRKSR
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccagacattctggaaaggctatctcaagctctcgctcgtcaccgcctccgtc
tcgctgacgccggcgacgaccgaaagcaacaaggtgcgtttccacgtcctcaatcgccag
acgaaaaaccgcgtcgaaagccgctatgtcgacagcgttacccataaaccggtgactgac
cgggaccaggtgaagggttatccgcgcggcgaggacgattatgttcttctcgaagacgag
gagatcgaggaagtcgggctcgaaagcacccgcaccatcgatatcgacagcttcgtccca
cgcggctcgatcgattggatctggtacgacaagccgcatttcctggcgccggaggacaag
gtcggcgtggaagccttctgcgtcatccgcgaagcgatgaaggcaaacgacgtcgtcggc
attgcccgcctggttctctatcgccgcgagcgcgccgtgctcctggagccgcaaggcaaa
ggcatcgtgctctggaccctgcgctatggcgacgaggtgcgcgaaccctcggccgaaatc
gacgacaaggcggagatcgacagcaagctcctgacgctgatgaagcggctggtgaaggaa
gagacgagggattggagcccgaccatggtgcaggatccgatccagaagcgcctgaaatcg
atgatccgcggcaaacagaagagcctgaagaaggcggcgcccgccaaagaacccgcaccg
gtaaaatcgaccggcaacgtcatcaacatcatggatgcgctgaagaagagcctggcttcg
gaaagcgggcggaagtcgcgttag
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