Rhizobium sp. N731: AMK02_CH01713
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Entry
AMK02_CH01713 CDS
T04809
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rhx
Rhizobium sp. N731
Pathway
rhx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AMK02_CH01713 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhx03021
]
AMK02_CH01713 (rpoC)
03400 DNA repair and recombination proteins [BR:
rhx03400
]
AMK02_CH01713 (rpoC)
Enzymes [BR:
rhx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AMK02_CH01713 (rpoC)
Transcription machinery [BR:
rhx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AMK02_CH01713 (rpoC)
DNA repair and recombination proteins [BR:
rhx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AMK02_CH01713 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Apocytochr_F_C
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ANK85319
LinkDB
All DBs
Position
1717891..1722099
Genome browser
AA seq
1402 aa
AA seq
DB search
MNQEVMNLFNPQVPAQNFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRISTLLDMTLKDVERVLYFENYIVTEPGLTALKEHQLLSEEEYMLAVDEYGEDQFTA
MIGAEAIYEMLASMNLEKIAGDLRSELADTTSDLKQKKLMKRLKIVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKEKPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPTLVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSILNQNEPGEGMAFSDLGELHHALE
NKVVTLHTKIRGRFKSIGEDGKPYSKIYETTPGRLLIGELLPKNGKVPFDICNQEMTKKN
ISKMIDTVYRHCGQKDTVIFCDRIMQLGFAHACRAGISFGKDDMVIPDTKAKIVNDTENL
VKEYEQQYNDGLITQGEKYNKVVDAWGKATEKVAEEMMARIKAVEFDENTGRQKPMNSIY
MMSHSGARGSPNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIVTHVDCGTETGLTMTAIVDAGQVVASLGARILGRT
ALDDIDHPVTGERIVDAGKMILEPDVIEIEKAGIQSIRIRSALTCEIQTGVCSVCYGRDL
ARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHLGGTATVVDQSFLEASYEGTVQIKNRN
VLRNSEGSLVAMGRNMTVQILDERGVERSSQRVAYGSKLHVDEGDKVKRGQRLAEWDPYT
RPMMTEVAGTVQFEDLVDGLSVLEATDESTGITKRQVIDWRSTPRGSDLKPAIVIKDASG
NVAKLSRGGDARFLLSVDAILSVEPGTKVSQGDVLARSPLESAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGTIRLGRDYKNKRRVIIEPAEDGVEPVEYLIPKGKPFHLQDGDYIE
KGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVVINDKHIEVIVRQMLQKVE
ITDAGDSTYIVGDNVDRIELEDVNDHLIEQGKKPASGEPVLLGITKASLQTPSFISAASF
QETTKVLTEAAIAGKTDGLQGLKENVIVGRLIPAGTGGTMTQIRRIATSRDELILEERRK
GTGAAVATPMLQDMAENAPAAE
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatcttttcaatccgcaggtgcctgcacagaatttcgattcc
attcggatttcgatcgcgtctccggagaagatcctctcctggtcctacggtgagatcaag
aagccggaaaccatcaactaccgcacgttcaagccggaacgcgacggtctgttctgcgcg
cgcatctttggcccgatcaaggactacgaatgcttgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgaaaagtgcggcgtcgaagtcacgctgtcgcgcgttcgccgt
gagcgcatgggccatatcgagctcgctgctccggttgcccacatctggttcctgaagtcg
ctgccgtcgcgcatttcgacactgctcgacatgacgctgaaggatgtcgagcgcgtcctc
tacttcgaaaactatatcgtcaccgagccgggcctgaccgctctcaaggagcaccagctc
ctctcggaagaagagtacatgctcgccgtcgacgagtacggcgaagaccagttcaccgcg
atgatcggcgctgaggcgatctacgagatgctggcttcgatgaacctcgaaaagatcgcc
ggcgatctgcgctccgagcttgccgacaccacgtcggatctcaagcagaagaagctgatg
aagcgcctgaagatcgtcgagaacttcatggagtcaggcaatcgtccggaatggatgatc
atgaaggtcgttccggtcatcccgccggatctgcgcccgctcgtgccgctcgacggtggc
cgtttcgcgacgtcggatctgaacgatctctatcgccgcgtcatcaaccgtaacaaccgt
ctgaagcgcctcatcgaactgcgcgctccgggcatcatcatccgcaacgaaaagcgcatg
ctgcaggaatctgtcgacgcgctcttcgataacggccgccgcggccgcgtcatcaccggc
gccaacaagcgtccgctgaagtcgctgtccgacatgctgaagggcaagcagggccgcttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgttcggtgatcgtcaccggt
ccggaactgaagctgcatcagtgcggtcttccgaagaagatggcgctcgaactctttaag
ccgttcatctatgcccgcctcgacgccaagggttactcctcgaccgtcaagcaggccaag
aagctggtcgagaaggaaaagccggaagtttgggatatcctcgacgaggtcatccgcgaa
catcctgttcttctgaaccgcgcaccgacgctgcaccgcctgggcatccaggccttcgag
cccaccctggtcgaaggcaaggccatccagctgcacccgctcgtctgcacggccttcaac
gccgacttcgacggtgatcagatggctgttcacgtgccgctgtcgctcgaagcccagctc
gaagcccgcgtgctgatgatgtcgaccaacaacatcctgcacccggcaaacggcgcgccg
atcatcgttccctcgcaggacatggttctcggcctgtactatctgtcgatcctgaaccag
aacgagccgggcgaaggcatggccttctccgatctcggcgagctgcatcacgcgctggaa
aacaaggtcgtgacgctgcacaccaagatccgcggccgcttcaagtcgatcggcgaggat
ggcaagccttactcgaagatctacgagacgacgcctggccgtctgctcatcggcgaactg
ctgccgaaaaatggcaaggtgcccttcgacatctgcaaccaggaaatgaccaagaagaac
atctccaagatgatcgacacggtctaccgccattgcggccagaaggacacggtcatcttc
tgcgaccgcatcatgcagctcggcttcgcccatgcctgccgtgccggcatttcgttcggc
aaggacgacatggtcattccggacacgaaggccaagatcgtcaacgacaccgaaaatctg
gtgaaggaatacgagcagcagtacaatgacggcctcatcacccagggcgaaaagtacaac
aaggttgtcgatgcctggggcaaggcgactgaaaaggtcgccgaagagatgatggcacgc
atcaaggcggtcgaattcgacgagaacaccggccgtcagaagccgatgaactcgatctac
atgatgagccactccggcgcccgcggttctccgaaccagatgcgccagctgggcggcatg
cgcggcctgatggccaagccgtcgggcgaaatcatcgagacgccgatcatctcgaacttc
aaggaaggcctgaccgtcaacgagtacttcaactcgacgcacggcgcccgcaagggtctg
gcagacaccgccttgaagaccgcaaactccggttacctgacccgccgtctcgtcgacgtc
gcgcaggattgcatcgtcacgcacgtcgattgcggcaccgaaaccggcctgaccatgacc
gccatcgtcgatgccggccaggtcgtcgcctcgctcggcgcccgtattctcggccgcacg
gcgctcgacgacatcgatcatccggtgacgggtgagcgcatcgtcgatgccggcaagatg
atcctcgagcctgatgtcatcgaaatcgagaaggccggtatccagtcgatccgcatccgc
tcggcgctgacctgcgaaatccagacgggcgtctgctcggtctgctacggccgcgacctc
gcgcgcggtacgccggtcaacatgggcgaagccgtcggcgtcatcgccgctcagtcgatc
ggcgagccgggaactcagctcaccatgcgtaccttccaccttggcggtacggcaaccgtg
gtcgaccagtcgttcctggaggcctcgtacgaaggtacagtgcagatcaagaaccgcaac
gtgctgcgcaactctgaaggcagcctcgttgccatgggccgcaacatgaccgtccagatc
ctggacgagcgcggcgtcgagcgctcttcgcagcgtgtcgcctacggttcgaagctgcat
gtcgacgaaggtgacaaggtcaagcgcggccagcgtctggcggagtgggatccttacacc
cgtccgatgatgacggaagttgccggtaccgttcagttcgaagacctcgtcgatggtctc
tcggttctggaagcgaccgacgaatccaccggcatcaccaagcgtcaggtcatcgactgg
cgttcgaccccgcgcggctcggatctcaagccggcgattgtcatcaaggacgccagcggc
aatgtcgccaagctgtcccgtggtggtgacgcccgcttcctgctctcggtcgacgccatc
ctgtcggtcgagccgggcacgaaggtctcgcagggtgacgttctcgcccgttcgccgctc
gaaagcgccaagaccaaggacatcaccggcggtttgccgcgtgttgccgaactgttcgaa
gctcgccgtccgaaggatcacgccatcatcgcagagatcgatggtacgatccgccttggc
cgcgactacaagaacaagcgtcgcgtcatcatcgagccggcggaagacggtgtcgagcct
gtcgaatacctgattccgaagggcaagcccttccaccttcaggacggcgactatatcgaa
aagggtgactacatcctcgacggtaacccggctccgcacgacatcctggcgatcaagggc
gtggaggctcttgcttcctacctcgtcaacgaaatccaggaagtctatcgcctgcagggc
gtcgtcatcaacgacaagcacatcgaggtgatcgtccgtcagatgctgcagaaggtggag
atcaccgatgccggcgactcgacctacatcgtcggcgacaacgtcgaccggatcgagctg
gaggacgtcaacgaccacctgatcgagcagggcaagaagcccgccagcggcgagccggtt
cttctcggcatcaccaaggcgtcgctgcagaccccgtccttcatctcggccgcgtccttc
caggaaacgaccaaggtgctgacggaagctgcaatcgccggaaagaccgacggtctgcag
ggcttgaaggaaaacgtcatcgtcggccgcctcattccggccggcaccggcggcaccatg
acccagatccgccgcatcgccacgtcgcgcgacgagctcatcctcgaagagcgccgcaag
ggcactggggcagcggtcgccaccccgatgctgcaggacatggccgaaaacgccccggct
gcggaataa
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integrated database retrieval system
