KEGG   Rhizobium sp. N731: AMK02_CH02009
Entry
AMK02_CH02009     CDS       T04809                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rhx  Rhizobium sp. N731
Pathway
rhx00010  Glycolysis / Gluconeogenesis
rhx00020  Citrate cycle (TCA cycle)
rhx00260  Glycine, serine and threonine metabolism
rhx00280  Valine, leucine and isoleucine degradation
rhx00310  Lysine degradation
rhx00380  Tryptophan metabolism
rhx00620  Pyruvate metabolism
rhx00630  Glyoxylate and dicarboxylate metabolism
rhx00640  Propanoate metabolism
rhx00670  One carbon pool by folate
rhx00785  Lipoic acid metabolism
rhx01100  Metabolic pathways
rhx01110  Biosynthesis of secondary metabolites
rhx01120  Microbial metabolism in diverse environments
rhx01200  Carbon metabolism
rhx01210  2-Oxocarboxylic acid metabolism
rhx01240  Biosynthesis of cofactors
Module
rhx_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rhx_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhx_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rhx_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rhx00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    AMK02_CH02009 (lpdA)
   00020 Citrate cycle (TCA cycle)
    AMK02_CH02009 (lpdA)
   00620 Pyruvate metabolism
    AMK02_CH02009 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    AMK02_CH02009 (lpdA)
   00640 Propanoate metabolism
    AMK02_CH02009 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AMK02_CH02009 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    AMK02_CH02009 (lpdA)
   00310 Lysine degradation
    AMK02_CH02009 (lpdA)
   00380 Tryptophan metabolism
    AMK02_CH02009 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    AMK02_CH02009 (lpdA)
   00670 One carbon pool by folate
    AMK02_CH02009 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhx04147]
    AMK02_CH02009 (lpdA)
Enzymes [BR:rhx01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     AMK02_CH02009 (lpdA)
Exosome [BR:rhx04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   AMK02_CH02009 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored FAD_binding_3 HI0933_like NAD_binding_8 GIDA DAO Thi4 Lys_Orn_oxgnase Amino_oxidase 2-Hacid_dh_C AlaDh_PNT_C 3HCDH_N
Other DBs
NCBI-ProteinID: ANK85594
LinkDB
Position
1990473..1991918
AA seq 481 aa
MAESYDVIIIGSGPGGYVAAIRAAQLGLKTAIVEREHMGGICLNWGCIPTKALLRSAEVL
DHANHFKDFGLVLEGTVKPDAKAVVGRSRAVSARLNAGVGFLMKKNKIDIIWGEAKITKP
GEIVVGKSSKPVVEPQHPLPKNVKGEGTYSAKHIIIATGARPRALPGIEPDGKLIWTYFE
ALKPDALPKSLIVMGSGAIGIEFASFYRSMGVDVTVVEVMPTIMPVEDAEITAIARKQLE
KRGLKIFTSAKVTKVEKGAGSITAHVETSDGKVQQITADRMISAVGVQGNIGNLGLEGLG
VKTDRGCVVADGYGKTNVAGIYAIGDVAGPPMLAHKAEHEGVVCVEKIAGLPNVHPTDKG
KVPGCTYCNPQVASVGLTEAKAKELGRDIRVGRFSFAANGKAIALGEDQGMVKVIFDKKT
GELLGAHMVGAEVTELIQGFVVAMNLETTEEELMHTIFPHPTVSETMKEAVLDAYGRVLN
A
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggctgaatcctacgacgtcatcatcatcggctccggccccggcggctatgtcgccgcc
atccgcgcagctcagctcggcctcaagaccgcgatcgtcgagcgcgagcatatgggcggc
atctgcctgaactggggctgcatcccgaccaaggcgctgctgcgttcggccgaggtgctc
gatcacgccaatcacttcaaggatttcggccttgttctcgaaggcacggtcaagccggat
gccaaggccgtcgttggccgctcgcgcgctgtctccgcccgcctcaacgccggcgttggc
ttcctgatgaagaagaacaagatcgacatcatctggggcgaagcaaaaattaccaagcca
ggcgagatcgtcgtcggcaaatcgtcgaaaccggtggtcgagccgcagcacccgctgccg
aagaacgtcaagggcgagggcacctattccgccaagcacatcatcatcgcgaccggcgcc
cgtccgcgcgcgctgccgggcatcgagcccgatggcaagctgatctggacctatttcgag
gcgctgaagccggatgcgctgccgaagtcgctgatcgttatgggctcgggcgcgatcggc
atcgaattcgcaagcttctatcgttcgatgggtgttgatgtcacggtcgtcgaagtcatg
ccgaccatcatgccggtcgaggatgccgaaatcaccgccatcgcccgcaagcagctggaa
aagcgcggcctcaagatcttcaccagcgccaaggtcacgaaggtcgagaagggtgccggc
agcatcaccgcccatgtcgagacttcagatggaaaggtccagcagatcaccgccgaccgg
atgatttcggccgtcggcgttcagggcaacatcggaaacctcggcctcgagggacttggg
gtgaagaccgaccgcggctgcgtcgttgccgatggttacggcaagaccaatgtcgccggc
atctatgcgatcggcgatgtggccggcccgccgatgctggcccacaaggccgagcacgag
ggtgtcgtctgcgtcgagaagatcgccggcctgccgaatgttcatcccaccgacaagggc
aaggtcccgggctgcacctattgcaatccgcaggtcgcttccgtcggcctcaccgaagcc
aaggccaaggagcttggccgcgacatccgtgtcggccgcttctccttcgcggcaaacggc
aaggcgatcgcgctcggtgaagatcagggcatggtcaaggtgatcttcgacaagaagacc
ggcgagctgctcggcgcccacatggtcggcgccgaagtcaccgaactcatccagggcttc
gtcgtcgcgatgaacctcgaaacgacagaggaagagctgatgcatacgatcttcccgcat
ccgacggtatccgagacgatgaaggaagcggtgctcgatgcttatggtcgtgtgctgaac
gcttga

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