Rhizobium sp. N731: AMK02_CH02313
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Entry
AMK02_CH02313 CDS
T04809
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rhx
Rhizobium sp. N731
Pathway
rhx00260
Glycine, serine and threonine metabolism
rhx00630
Glyoxylate and dicarboxylate metabolism
rhx00670
One carbon pool by folate
rhx00785
Lipoic acid metabolism
rhx01100
Metabolic pathways
rhx01110
Biosynthesis of secondary metabolites
rhx01200
Carbon metabolism
Module
rhx_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rhx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AMK02_CH02313 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AMK02_CH02313 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AMK02_CH02313 (gcvP)
00670 One carbon pool by folate
AMK02_CH02313 (gcvP)
Enzymes [BR:
rhx01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
AMK02_CH02313 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ANK85891
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Position
2304269..2307133
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AA seq
954 aa
AA seq
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MTTPTEFQFTDYQPYDFANRRHIGPSPAEMTDMLKVIGYSSLDGLIDATLPSAIRQKAPL
VWGAPMTEREALDKLRETANKNKVLVSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQ
PEISQGRLEALLNYQTMVCDLTGLDVANASLLDEATAAAEGMAMAERVSKSKAKAFFVDA
DCHPQTIALIRTRAEPLGWQVIVGNPFTDLDPVDVFGAIFQYPGTHGHVHDFTGLISRLH
QTGAIAVVAADILALTLLKSPGEMGADIAIGSSQRFGVPVGYGGPHAAYMAVKDAIKRSM
PGRLVGVSVDARGNRAYRLSLQTREQHIRREKATSNICTAQVLLAVMASMYAVFHGPKGI
KAIAQQVHQKAVLMAKGLEKLGYKVEPESFFDTITVDVGHMQGLILRAAVAEGVNLRKVG
ETGIGISLDERTRPATLEAVWRAFGGNFKIADFEPSYRLPKGLLRTSEYLTHPIFHMNRA
ESEMTRYIRRLSDRDLALDRAMIPLGSCTMKLNATAEMLPITWPEFSDIHPFVPADQALG
YREMLDDLTEKLCAVTGYDAFSMQPNSGAQGEYAGLLTIRNYHIANGEGHRDVCLIPTSA
HGTNPASAQMAGMKVVVVKVRENGDIDMEDFRAKAEEHAANLSCCMITYPSTHGVFEETV
KQICELVHQHGGQVYLDGANMNAMVGLSRPGDIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKAHLAPHLPGHPETDGRPGAVSAAAFGSASILPISWSYCLMMGGEGLTQATKVAILNA
NYIAARLKGAYDVLYKSKTGRVAHECIIDTRPLVDSSGVTVDDVAKRLIDCGFHAPTMSW
PVAGTLMIEPTESETKAELDRFCEAMLAIREEARAIEDGRMDKANNPLKNAPHTVEDLVG
EWDRPYSREQACFPPGAFRVDKYWSPVNRVDNVYGDRNLICTCPPVESYAEAAE
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgccgaccgaattccagttcaccgactatcagccctacgatttcgccaatcgc
cgtcacatcggcccctcgccggccgaaatgaccgacatgctgaaggtgatcggctatagc
agcctcgacggcttgatcgacgcgacgctgccgtccgcgatccgtcagaaggcgccgctc
gtctggggcgcgccgatgaccgagcgtgaggcgctcgacaagctgcgcgagacggccaac
aagaacaaggtgctggtttcgctgatcggccagggttactacggcacgatcacgccgcct
gtcattcagcgcaacatcctggaaaaccccgcctggtacacggcctatacaccttaccag
ccggagatcagccagggccgcctggaagcgctcttgaactaccagacgatggtctgcgat
ttgaccggcctcgatgtcgccaacgcctcgctgctcgacgaggcgaccgctgccgccgaa
ggcatggcgatggccgagcgcgtctccaagtcgaaggccaaggccttcttcgtcgatgcc
gactgccatccgcagaccattgccctcattcgcactcgcgccgaaccgctcggttggcag
gtcatcgtcggcaatcccttcaccgatctcgatcccgtcgatgtcttcggcgcgatcttc
cagtatcccggcacgcacggtcacgtgcatgacttcaccggcctgatctcccgcctgcac
cagaccggcgcaatcgccgtggtcgcagccgacattctggcgctgacgctgctgaaatca
cccggcgaaatgggcgccgatatcgccatcggctcctcgcagcgcttcggcgttcccgtc
ggttacggcggtccgcatgccgcctatatggcggtcaaggacgccatcaagcgttccatg
cccggccgcctcgtgggtgtgtccgtcgatgcccgcggcaatcgcgcctaccgcttgtcg
ctgcagacccgcgaacagcatatccgccgcgaaaaggcgacatcgaacatctgcaccgcc
caggtgctgctcgccgtcatggcctcgatgtacgccgtcttccacggtccgaagggcatc
aaggcgattgcccagcaggtgcaccagaaagccgtgctgatggccaagggcctggaaaag
ctcggctacaaggtggagcccgaaagcttcttcgacacgatcaccgtcgatgtcggccat
atgcagggcctgatcctgcgcgccgccgtcgccgagggcgtcaatctgcgcaaggtcggc
gaaaccggaatcggcatcagcctcgacgagcgcacgcgccccgcgacactcgaagccgtc
tggcgcgccttcggcggcaatttcaagatcgccgatttcgagccgtcctaccgcctgccg
aagggcctgctcaggaccagcgagtatctcactcatccgatcttccacatgaaccgggcc
gaaagcgaaatgacgcgctacatccgccggctgtccgatcgcgacctcgcgctcgaccgt
gcgatgatcccgctcggctcctgcacgatgaagctcaatgccacggcggaaatgctgccg
atcacctggccggaattttccgatatccatcccttcgtgccggcagaccaggcgctcggc
taccgcgagatgcttgatgatctcaccgaaaaactctgcgccgtcaccggctacgacgcc
ttctcgatgcagcctaattccggcgcgcaaggcgaatatgccggcctgctgacgatccgc
aactaccacatcgccaatggcgaaggccatcgcgacgtctgcctgatcccgacttcggcg
cacggcaccaaccctgcctcggcgcagatggccggcatgaaggttgtcgtcgtcaaggtg
cgcgaaaacggcgacatcgacatggaggatttccgcgccaaagccgaggagcacgcggcc
aatctctcctgctgcatgatcacctatccctcgacgcacggcgtgttcgaagagacggtc
aagcaaatctgcgaactggtgcatcagcacggcggccaggtctatctcgacggcgccaac
atgaacgccatggtcggcctgtcccgccccggtgacatcggctccgacgtttcccacctc
aacctgcacaagaccttctgcatcccgcatggcggcggcggccctggcatgggcccgatc
ggcgtcaaggcgcatctggcgccgcacctgccgggccacccggagaccgacggccggccg
ggtgccgtttcggcggcagccttcggctcggcgtcgatcctgccgatctcctggagctac
tgtctgatgatgggtggcgaaggtctgacccaggcgaccaaggtggcgatcctcaacgcc
aactatatcgccgcccggctgaagggcgcttatgacgtgctctacaaatcgaaaaccggc
cgcgtcgcgcatgaatgcatcatcgacacccgcccgctggtcgacagttcaggtgtcacc
gtcgacgacgtcgccaaacggctgatcgactgcggcttccatgcgccgacaatgagttgg
ccggtcgccggcacgctgatgattgagccgacggaaagcgagaccaaggccgagctcgac
cgcttctgcgaggcgatgctggcgatccgcgaggaagcccgtgccatcgaggacggccgc
atggacaaggccaacaacccgctgaagaacgccccgcacacggtggaagaccttgtcggc
gaatgggatcggccttacagccgggaacaggcctgcttcccgcccggcgctttccgcgtc
gacaaatactggtccccggtcaaccgcgtcgacaatgtctacggtgaccgcaacctgatc
tgcacctgcccgccggtggaaagctacgcggaggctgcggaataa
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