KEGG   Rhizobium sp. N731: AMK02_PB00090
Entry
AMK02_PB00090     CDS       T04809                                 
Symbol
lpdV
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rhx  Rhizobium sp. N731
Pathway
rhx00010  Glycolysis / Gluconeogenesis
rhx00020  Citrate cycle (TCA cycle)
rhx00260  Glycine, serine and threonine metabolism
rhx00280  Valine, leucine and isoleucine degradation
rhx00310  Lysine degradation
rhx00380  Tryptophan metabolism
rhx00620  Pyruvate metabolism
rhx00630  Glyoxylate and dicarboxylate metabolism
rhx00640  Propanoate metabolism
rhx00670  One carbon pool by folate
rhx00785  Lipoic acid metabolism
rhx01100  Metabolic pathways
rhx01110  Biosynthesis of secondary metabolites
rhx01120  Microbial metabolism in diverse environments
rhx01200  Carbon metabolism
rhx01210  2-Oxocarboxylic acid metabolism
rhx01240  Biosynthesis of cofactors
Module
rhx_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rhx_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhx_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rhx_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rhx00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    AMK02_PB00090 (lpdV)
   00020 Citrate cycle (TCA cycle)
    AMK02_PB00090 (lpdV)
   00620 Pyruvate metabolism
    AMK02_PB00090 (lpdV)
   00630 Glyoxylate and dicarboxylate metabolism
    AMK02_PB00090 (lpdV)
   00640 Propanoate metabolism
    AMK02_PB00090 (lpdV)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AMK02_PB00090 (lpdV)
   00280 Valine, leucine and isoleucine degradation
    AMK02_PB00090 (lpdV)
   00310 Lysine degradation
    AMK02_PB00090 (lpdV)
   00380 Tryptophan metabolism
    AMK02_PB00090 (lpdV)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    AMK02_PB00090 (lpdV)
   00670 One carbon pool by folate
    AMK02_PB00090 (lpdV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhx04147]
    AMK02_PB00090 (lpdV)
Enzymes [BR:rhx01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     AMK02_PB00090 (lpdV)
Exosome [BR:rhx04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   AMK02_PB00090 (lpdV)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like FAD_oxidored GIDA NAD_binding_8 DAO UDPG_MGDP_dh_N FAD_binding_2 Lys_Orn_oxgnase FAD_binding_3 3HCDH_N
Other DBs
NCBI-ProteinID: ANK88018
LinkDB
Position
pRspN731b:96191..97585
AA seq 464 aa
MKEIVCKLLVIGAGPGGYVCAVRAGQLGVDTVIVEAGKPGGTCLTVGCIPSKALIHAAEE
FDATQRMFAGKNPMGIRVEGLSIDLARTIAWKDGIVGRLTGGVSGLLQKARVKIVHGRAH
FRDGKTVEVETETGQQIIRAETVVIATGSDPVELANLPFGGRVISSTEALSLTELPRKLV
VVGGGYIGLELGMAFAKMGSAVTVVEATQQVLPLYDAELVRPVLRKLTESGIRVLTGGKA
MGLANCEALLVETSDGRRESVPADRILVTVGRRPRTAGSGLEELDLNRAGPYLRIDDRCR
TSMRGIYAIGDVTGEPMLAHRAMAQGEMVAEIIAGKKRAWDKRCIPAICFTDPEIVSAGL
SPAEAQAQGYEIRTGQFPFSANGRAMTMLSEEGFVRVVARADTNLVLGLQAVGAGVSELS
AAFALAIEMGARLEDIAGTIHAHPTRSEAVMEAALKAMGSALHI
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgaaagagattgtctgcaagctcctcgtcattggcgccggcccgggtggttatgtctgc
gccgtccgcgccgggcagctcggtgtcgataccgtcatcgtcgaagccggcaagcccggc
ggcacctgcttgacggtcggctgcattccttccaaggctttgatccatgcggctgaggaa
ttcgacgcgacgcagaggatgttcgccggcaaaaatccgatgggcatccgcgtcgaaggt
ctctcgatcgatcttgccaggacgatcgcctggaaggacggcatcgtcggccggctgaca
ggcggcgtctcggggctgttacagaaggcgcgggtcaagatcgtccatggccgggctcat
tttcgcgacggcaagacggtggaggtcgagacggaaaccggccagcagatcattcgcgcc
gagaccgtggtgatcgccaccggctccgatccggtggagcttgccaatctgccattcggc
ggccgcgtcatttcctcgacggaggcgctgtcgctgaccgagctgccgagaaaactggtc
gtggtcggcggcggttatatcggcctggagctcggaatggccttcgccaagatgggatcg
gctgtgacggtggtcgaggcgacacagcaggtgttgccgctctacgatgccgaactcgtg
cggcccgtcctgcgcaagctcaccgaaagcggcatccgggtgctgacaggcggcaaggcg
atgggccttgccaattgcgaggcgttgcttgtcgaaacctccgatggccgccgagaaagc
gtgcctgccgaccgcatcctcgtgaccgtcggtcgccgcccgcgaacggcgggatccggt
ctcgaagagctcgatctcaatcgcgctggtccctatctcaggatcgacgatcgctgccgc
acctcgatgcgcggcatctatgcgatcggcgacgtcaccggcgaaccgatgctggcgcat
cgggccatggcgcaaggcgagatggtggcggagatcatcgccggcaagaagcgcgcctgg
gacaagcgctgcatacccgccatctgctttaccgaccccgagatcgtcagcgctggcctc
tcgccggcggaagcgcaggcgcaaggctatgaaatccgcaccggccagtttccgttcagc
gccaatggacgggcaatgacgatgctctcggaggagggtttcgtgcgcgtcgtcgcccgt
gccgacaccaacctcgttctcggcctgcaggcggtgggggcaggggtctccgaactgtcg
gcggcctttgccctggcgatcgagatgggcgcgcgcctggaggatattgcaggcaccatc
cacgcccatccgacccgcagtgaagcggtcatggaggcagcgctgaaagccatgggaagc
gctttgcacatctga

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