Rhizobium sp. N731: AMK02_PB00090
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Entry
AMK02_PB00090 CDS
T04809
Symbol
lpdV
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rhx
Rhizobium sp. N731
Pathway
rhx00010
Glycolysis / Gluconeogenesis
rhx00020
Citrate cycle (TCA cycle)
rhx00260
Glycine, serine and threonine metabolism
rhx00280
Valine, leucine and isoleucine degradation
rhx00310
Lysine degradation
rhx00380
Tryptophan metabolism
rhx00620
Pyruvate metabolism
rhx00630
Glyoxylate and dicarboxylate metabolism
rhx00640
Propanoate metabolism
rhx00670
One carbon pool by folate
rhx00785
Lipoic acid metabolism
rhx01100
Metabolic pathways
rhx01110
Biosynthesis of secondary metabolites
rhx01120
Microbial metabolism in diverse environments
rhx01200
Carbon metabolism
rhx01210
2-Oxocarboxylic acid metabolism
rhx01240
Biosynthesis of cofactors
Module
rhx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhx_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhx_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rhx_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rhx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
AMK02_PB00090 (lpdV)
00020 Citrate cycle (TCA cycle)
AMK02_PB00090 (lpdV)
00620 Pyruvate metabolism
AMK02_PB00090 (lpdV)
00630 Glyoxylate and dicarboxylate metabolism
AMK02_PB00090 (lpdV)
00640 Propanoate metabolism
AMK02_PB00090 (lpdV)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AMK02_PB00090 (lpdV)
00280 Valine, leucine and isoleucine degradation
AMK02_PB00090 (lpdV)
00310 Lysine degradation
AMK02_PB00090 (lpdV)
00380 Tryptophan metabolism
AMK02_PB00090 (lpdV)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AMK02_PB00090 (lpdV)
00670 One carbon pool by folate
AMK02_PB00090 (lpdV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhx04147
]
AMK02_PB00090 (lpdV)
Enzymes [BR:
rhx01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
AMK02_PB00090 (lpdV)
Exosome [BR:
rhx04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
AMK02_PB00090 (lpdV)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
HI0933_like
FAD_oxidored
GIDA
NAD_binding_8
DAO
UDPG_MGDP_dh_N
FAD_binding_2
Lys_Orn_oxgnase
FAD_binding_3
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ANK88018
LinkDB
All DBs
Position
pRspN731b:96191..97585
Genome browser
AA seq
464 aa
AA seq
DB search
MKEIVCKLLVIGAGPGGYVCAVRAGQLGVDTVIVEAGKPGGTCLTVGCIPSKALIHAAEE
FDATQRMFAGKNPMGIRVEGLSIDLARTIAWKDGIVGRLTGGVSGLLQKARVKIVHGRAH
FRDGKTVEVETETGQQIIRAETVVIATGSDPVELANLPFGGRVISSTEALSLTELPRKLV
VVGGGYIGLELGMAFAKMGSAVTVVEATQQVLPLYDAELVRPVLRKLTESGIRVLTGGKA
MGLANCEALLVETSDGRRESVPADRILVTVGRRPRTAGSGLEELDLNRAGPYLRIDDRCR
TSMRGIYAIGDVTGEPMLAHRAMAQGEMVAEIIAGKKRAWDKRCIPAICFTDPEIVSAGL
SPAEAQAQGYEIRTGQFPFSANGRAMTMLSEEGFVRVVARADTNLVLGLQAVGAGVSELS
AAFALAIEMGARLEDIAGTIHAHPTRSEAVMEAALKAMGSALHI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagattgtctgcaagctcctcgtcattggcgccggcccgggtggttatgtctgc
gccgtccgcgccgggcagctcggtgtcgataccgtcatcgtcgaagccggcaagcccggc
ggcacctgcttgacggtcggctgcattccttccaaggctttgatccatgcggctgaggaa
ttcgacgcgacgcagaggatgttcgccggcaaaaatccgatgggcatccgcgtcgaaggt
ctctcgatcgatcttgccaggacgatcgcctggaaggacggcatcgtcggccggctgaca
ggcggcgtctcggggctgttacagaaggcgcgggtcaagatcgtccatggccgggctcat
tttcgcgacggcaagacggtggaggtcgagacggaaaccggccagcagatcattcgcgcc
gagaccgtggtgatcgccaccggctccgatccggtggagcttgccaatctgccattcggc
ggccgcgtcatttcctcgacggaggcgctgtcgctgaccgagctgccgagaaaactggtc
gtggtcggcggcggttatatcggcctggagctcggaatggccttcgccaagatgggatcg
gctgtgacggtggtcgaggcgacacagcaggtgttgccgctctacgatgccgaactcgtg
cggcccgtcctgcgcaagctcaccgaaagcggcatccgggtgctgacaggcggcaaggcg
atgggccttgccaattgcgaggcgttgcttgtcgaaacctccgatggccgccgagaaagc
gtgcctgccgaccgcatcctcgtgaccgtcggtcgccgcccgcgaacggcgggatccggt
ctcgaagagctcgatctcaatcgcgctggtccctatctcaggatcgacgatcgctgccgc
acctcgatgcgcggcatctatgcgatcggcgacgtcaccggcgaaccgatgctggcgcat
cgggccatggcgcaaggcgagatggtggcggagatcatcgccggcaagaagcgcgcctgg
gacaagcgctgcatacccgccatctgctttaccgaccccgagatcgtcagcgctggcctc
tcgccggcggaagcgcaggcgcaaggctatgaaatccgcaccggccagtttccgttcagc
gccaatggacgggcaatgacgatgctctcggaggagggtttcgtgcgcgtcgtcgcccgt
gccgacaccaacctcgttctcggcctgcaggcggtgggggcaggggtctccgaactgtcg
gcggcctttgccctggcgatcgagatgggcgcgcgcctggaggatattgcaggcaccatc
cacgcccatccgacccgcagtgaagcggtcatggaggcagcgctgaaagccatgggaagc
gctttgcacatctga
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