KEGG   Rhodoferax koreensis: RD110_00330
Entry
RD110_00330       CDS       T04721                                 
Name
(GenBank) Fe3+/spermidine/putrescine ABC transporter ATP-binding protein
  KO
K02052  putative spermidine/putrescine transport system ATP-binding protein
Organism
rhy  Rhodoferax koreensis
Pathway
rhy02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rhy00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RD110_00330
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rhy02000]
    RD110_00330
Transporters [BR:rhy02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    RD110_00330
SSDB
Motif
Pfam: ABC_tran TOBE_2 SMC_N AAA_21 AAA_5 nSTAND1 AAA_25 AAA AAA_16 Rad17 AAA_30 NACHT AAA_22 RsgA_GTPase Mg_chelatase AAA_23 OB_MalK nSTAND_NTPase5 ORC-CDC6-like AAA_28 AAA_29 CysA_C_terminal AAA_19 TsaE NB-ARC DO-GTPase2 ATPase_2 AAA_18 nSTAND3 AAA_14
Other DBs
NCBI-ProteinID: APW40371
UniProt: A0A1P8K363
LinkDB
Position
complement(74128..75213)
AA seq 361 aa
MESTAGQSLTLDDIVHRYGGSVAVDHVTLEVAAGELVALLGPSGCGKTTLLRIIAGFITQ
TSGKVVIGGRRIDELPPAKRNVGIVFQNYALFPHMTVAENVGYGLAARGTDKHAANKRTA
EMLEMVQLGHLAGRLTKQLSGGQQQRVALARALAIEPRVLLLDEPFSALDKSLRLDMQIE
IKRIQRAAGTTAIIVTHDQEEALGMADRVAVLSQGRLEQFAAPSAVYDTPATYFVNQFVG
TANVLAGTLESVGTDGTFVHLDDGTVIPARTPAGLAQGSKVVACVRPENMRLADEPLGAL
AGTVELGMPLGATIVHEIRTASGQRIKLSEPRMPGTVPREPGTRVWVKPVTASSVTVFAA
P
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaatcgaccgccggacaaagcctcaccctcgacgacatcgtgcaccgctacggcggc
tcggtggcggtggaccacgtcaccctcgaagtcgccgccggcgaactcgtcgccttgctc
ggcccgagcggctgcggcaagaccacgctcctgcgcatcattgccggcttcatcacccag
acctcgggcaaggtggtgatcggcgggcgccgcatcgacgaattgccgccggccaaacgc
aacgtgggcatcgtgttccagaactatgcgctgtttccgcacatgacggtggccgagaac
gtgggctacggcctggccgcgcgcggcaccgacaagcacgccgccaacaagcgcacggca
gagatgctggagatggtgcagctcggccatctggccggccggctcaccaagcagctctcg
ggcggccagcagcaacgcgtggcgctggcgcgcgcgctggccatcgagccgcgggtgctg
ctgctcgacgaacctttctcggcgctcgacaagagcctgcggctggacatgcagatcgag
atcaagcgcatccagcgcgccgccggcaccacggccatcatcgtcacgcacgaccaggaa
gaagccctcggcatggccgaccgcgtggccgtgctgagccagggccggctcgaacagttc
gccgcgccatccgccgtgtacgacacgcccgccacctacttcgtgaaccagttcgtgggc
acggccaatgtgctcgccggcacgctcgaatcagtgggcaccgatggcacgtttgtccat
ctcgacgacggaaccgtcatccccgcacgcacccctgccggtctggcccagggcagcaag
gtcgtggcctgtgtgcgcccggaaaacatgcgcctggccgacgagccgctcggtgcgctg
gccggtacggtcgaactcggcatgccgctgggcgcgaccatcgtgcacgagatccgcacc
gccagcggccagcgcatcaagctctccgagccgcgcatgccgggcaccgtgccgcgcgag
cccggcacccgcgtttgggtcaagccggtcacggcttccagcgtcacggtgttcgccgcc
ccctga

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