Rhodoferax koreensis: RD110_00880
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Entry
RD110_00880 CDS
T04721
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhy
Rhodoferax koreensis
Pathway
rhy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD110_00880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhy02000
]
RD110_00880
Transporters [BR:
rhy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RD110_00880
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
APW35941
UniProt:
A0A1P8JQC4
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All DBs
Position
complement(194038..195651)
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AA seq
537 aa
AA seq
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MRTLSPVLNRRILVAAAASALVLAAGMHSAVAATPKDTLVVAFGFDDIITMDPAEAFELS
AGEIMGNTYDRLVRLDPADSSKLVGDVAKAWTISPDGKTYTFELKPGLKFASGNPLTAED
VAYSLQRAVMLDKSPAFILTQFGFGKDSVKDKIKATGPLTLTMETDKAYAPSFVLNCLTA
NVGAIVDKKLVASHEKDGDWGYAWMKTGYAGSGPLKLREWRANEVITLERNDNYYGPKMP
LARVLYRHVKESATQRLLLEKGDIDIARNLAPQDLAALASNKDVKTTSAPKGTVYYISLN
QKNPNLAKPEVREALKWLVDYSAIGDTLIKNIGVIDQNFMPVGLLGASTEMPYKLDVDKA
KALLTKAGLPNGFKVTIDMRTIQPVQGITESFQQTAKRAGIDIEIIPGDGKQVLTKYRAR
THDMYIGQWGADYWDPHTNATFVQNSDNSDDAKAKPLAWRNAWIVPALDKMADAAVLERD
TAKRKKMYEDMQAEFRKTSPFIMLFQQTEVAAVRSNVDGFKLGPTFDTNYMFLVSKK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccctgagccccgtgttgaatcgccgaatcctcgtcgcggccgccgcgtccgcc
ctcgtgctcgccgcgggcatgcattccgccgtcgccgccacgcccaaggacaccctggtc
gtggccttcggcttcgacgacatcatcaccatggacccggccgaagccttcgagctgtct
gccggcgagatcatgggcaacacctacgaccgcctggtgcgcctggaccccgccgactcc
tccaagctcgtcggcgacgtggccaaggcctggaccatctcgcccgacggcaagacctat
accttcgaactcaagcccggcctgaagttcgcctcgggcaacccgctcacggccgaggac
gtggcctattcactgcagcgcgcggtgatgctcgacaagtcgcccgccttcatcctcacc
caattcggcttcggcaaggattccgtcaaggacaagatcaaggccaccggcccgctcacg
ctgacgatggaaaccgacaaagcctacgcgccgtcgttcgtgctcaactgcctcaccgcc
aacgtgggggccatcgtcgacaagaagctcgtcgccagccacgaaaaggacggcgactgg
ggctacgcgtggatgaagaccggctacgccggctccggcccgctgaagctgcgcgaatgg
cgcgccaacgaagtcatcaccctggagcgcaacgacaactactacggccccaagatgcca
ctggcgcgcgtgctctaccgccacgtgaaggaatcggccacgcagcgcctgctgctggag
aaaggcgacatcgacatcgcgcgcaacctggcgccgcaggacctcgccgcgctggccagc
aacaaggacgtcaagaccacctcggcacccaagggcacggtctactacatcagcctgaac
cagaagaacccgaacctggccaagccggaggtgcgcgaggcgttgaagtggctggtggac
tattcggccatcggcgacaccctcatcaagaacatcggcgtgatcgaccagaacttcatg
ccggtcggcctgctcggcgcgagcaccgaaatgccctacaagctcgacgtggacaaggcc
aaggcgttgctgaccaaggccggcctgccgaacggcttcaaggtcaccatcgacatgcgc
accatccagccggtgcagggcatcaccgaatccttccagcagacggccaagcgcgccggc
atcgacatcgagatcatccccggcgacggcaagcaggtgctgaccaagtaccgcgcgcgc
acccacgacatgtacatcggccagtggggtgccgattactgggacccgcacaccaacgcc
accttcgtgcagaacagcgacaacagcgacgacgccaaggccaagccgctggcctggcgc
aacgcctggatcgtgcccgcgctcgacaagatggccgacgccgccgtgctcgaacgcgac
accgccaagcgcaagaagatgtacgaggacatgcaggccgagttccgcaagaccagcccc
ttcatcatgctgttccagcagaccgaagtggcggccgtgcgcagcaacgtcgatggcttc
aagctcggcccgaccttcgacaccaactacatgttcctggtcagcaagaagtaa
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