Rhodoferax koreensis: RD110_01835
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Entry
RD110_01835 CDS
T04721
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rhy
Rhodoferax koreensis
Pathway
rhy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD110_01835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhy02000
]
RD110_01835
Transporters [BR:
rhy02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RD110_01835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
nSTAND1
AAA_29
Rad17
AAA_25
RsgA_GTPase
ABC_ATPase
AAA_22
AAA_16
AAA_23
Gln-synt_C
Mg_chelatase
nSTAND_NTPase5
URGCP_GTPase
Motif
Other DBs
NCBI-ProteinID:
APW36100
UniProt:
A0A1P8JQS5
LinkDB
All DBs
Position
complement(394677..395777)
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AA seq
366 aa
AA seq
DB search
MNSNFSELRLDRLTRRFGLANKAQGAQVFTALDGLTMNIRRGEFIALLGPSGCGKSTALN
CIAGLLPVSDGGIWLDDTRIDILPPEKRGFGMVFQNYALFPHMSVAKNVGFGLAMRGVSS
SETAQRVKRALDLVQLNAHADKLPGQLSGGQQQRVAIARAIVIEPPLVLMDEPLSNLDAK
LRLEMRAEIRRIHKELGRATIYVTHDQDEALSLADRVVVMKDGVAQQIDAPHKIYSEPAN
LHVARFMGYRNLLPMAVRQTGNGTVRLEGSGLLLTGRAMQPLDGSALVAIRPEEFDIVAE
PGDNSFPVRITNVEYCGHDNIVDVSTLAGMKLIVRTTARCQVGDNVLLHIAPGKVLAYPD
DGSVSP
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaacttctccgagctgcggcttgaccggctgacgcgacgtttcggcctggcg
aacaaggcgcagggcgcgcaggtctttaccgcgctcgacggcctcaccatgaacatccgg
cgcggcgaattcatcgcgctgctcggaccgtcgggctgcggcaagtcgaccgcgctgaac
tgcatcgccggcctgctgccggtgtcggacggcggcatctggctcgacgacacccgcatc
gacatcctgccgccggaaaaacgcggcttcggcatggtgttccagaactacgcgctgttc
ccgcacatgagcgtggcgaagaacgtcggcttcggcctggcgatgcgcggcgtgtcgtcc
tccgaaaccgcgcaacgcgtgaagcgcgcgctcgacctggtgcagctcaacgcccacgcg
gacaagctgccgggccagctctccggcgggcagcagcagcgggtggcaatcgcacgcgcc
atcgtcatcgagccgccgctggtgctgatggacgaaccactgtccaacctcgacgccaag
ctgcgcctggagatgcgcgccgagatccgccgcatccacaaggaactcggccgcgccacc
atctacgtcacgcacgaccaggacgaagccctgtcgctggccgaccgcgtggtggtcatg
aaggacggcgtggcccagcagatcgacgcgccgcataagatctacagcgagccggccaac
ctgcacgtggcgcgtttcatggggtaccgcaacctgctgccgatggcggtgcgccagacc
ggaaacggcacggtgcggctcgaaggcagtggcctgctgctgaccggacgggccatgcag
ccgctggacggcagcgcgctggtggcgatccgcccggaggagttcgacatcgtggccgag
cccggcgacaacagcttcccggtgcgcatcaccaatgtcgaatactgcggccacgacaac
atcgtcgacgtgtcgacgctggccggcatgaagctcatcgtgcgcaccacggcgcgctgc
caggtcggcgacaacgtgctgctgcacatcgccccgggcaaggtgctggcgtatcccgac
gacgggagcgtgtcgccatga
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