Rhodoferax koreensis: RD110_01840
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Entry
RD110_01840 CDS
T04721
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rhy
Rhodoferax koreensis
Pathway
rhy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD110_01840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhy02000
]
RD110_01840
Transporters [BR:
rhy02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RD110_01840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
APW36101
UniProt:
A0A1P8JQU9
LinkDB
All DBs
Position
complement(395841..397028)
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AA seq
395 aa
AA seq
DB search
MSQAFLPRTRRAALAAVAGLALGGPALLQAQALPSAPVVINVVDAAGNLALTQGAFEAYQ
AANPKLVSKFTFTKAPAPEVPAKVKAMQGAGRSDIDMIIVGTDALAAGLEMNLWTKLFPD
FAAKFPGLKDNYLPSASKMNDLAKDHGVAIVFMPAGPLVEFNPDKVKTPPTTPAELLSWC
KANPNKLIYARPANSGPGRTFLMGLPYLLGDKDPMDPMKGWDKTWAYLKELNSCIEYYPT
GTGAVMKELGEGSRDMTLTVTGWDINPRALGIVPENYKVLPFKGMTWVNDAHYVVIPKGV
PPEKQAVVLDIMAFLLKPQQQAMTYDTGYFYPGPAVKNVPLSLAPQASQDVLKKFGRPEY
DGWLAQFPHATPLEPKAMVDAFRRWDQEIGTQKTK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagcctttcttccgcgcacccgccgtgcggccctggccgccgtcgcggggctc
gccctcggcggccctgcgctgctgcaggcccaggcgctgcccagcgcgcccgtcgtgatc
aacgtggtggacgcggccggcaacctggcactcacgcaaggcgcattcgaggcctaccag
gccgccaatcccaagctggtgtcgaaattcaccttcaccaaggcgccggcccccgaagtg
ccggccaaggtcaaggcgatgcagggcgcgggccgcagcgacatcgacatgatcatcgtc
ggcaccgacgcactggccgcgggcctggagatgaacctctggaccaagctgtttcccgac
ttcgcggccaagttccccggcctgaaggacaactacctgcccagcgccagcaagatgaac
gacctggccaaggaccatggggtggccatcgtcttcatgccggccggcccgctggtggag
ttcaaccccgacaaggtcaagacgccgccgaccacgccggcagagttgctgagctggtgc
aaggccaacccgaacaagctgatctacgcgcgcccggccaactccggcccgggccgcacc
ttcctgatgggcctgccctacctgctcggcgacaaggacccgatggatccgatgaagggc
tgggacaagacctgggcctacctgaaggagctgaactcctgcatcgagtactaccccaca
ggcacgggcgcggtgatgaaggagctcggcgaaggttcgcgcgacatgacgctcaccgtg
accggctgggacatcaacccacgcgcactcggcatcgtgcccgagaactacaaggtgctg
ccgttcaagggcatgacctgggtcaacgacgcgcactacgtcgtgatacccaagggcgtg
ccgcccgagaagcaggccgtggtgctcgacatcatggccttcctgctcaagccgcagcaa
caggcgatgacttacgacaccggctacttctaccccggcccggcggtgaagaacgtgccc
ctgtccctggcgccgcaggcgagccaggacgtgctgaagaaatttggccggcccgaatac
gacggctggctcgcgcagttcccgcacgccacgccgctcgagcccaaggccatggtcgat
gcgttccgccgctgggaccaggaaatcggcacgcagaagacgaagtga
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