KEGG   Rhodoferax koreensis: RD110_03135
Entry
RD110_03135       CDS       T04721                                 
Name
(GenBank) conjugal transfer protein TrbI
  KO
K20533  type IV secretion system protein TrbI
Organism
rhy  Rhodoferax koreensis
Pathway
rhy02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rhy00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RD110_03135
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhy02044]
    RD110_03135
Secretion system [BR:rhy02044]
 Type IV secretion system
  Trb secretion system protein
   RD110_03135
SSDB
Motif
Pfam: TrbI
Other DBs
NCBI-ProteinID: APW36328
UniProt: A0A1P8JRH8
LinkDB
Position
complement(657527..658813)
AA seq 428 aa
MATSDMPDTAPAAAPKVEPESVALRASPRPVTRLNRRMLAVGAGVLAAAVLGGTLWSLQS
NKRERNLATELFNVDRVSRAENLDRLPKDYAGIPPALKPAPPVLGEPLPGDLGPAIVKAQ
QPMETRPPGGGVDPAQAERLAAEEAARSSVFFRSGGSNTGPRPGAVQAVADPSALASGNQ
PFNPMGATATAAQPSDPTTAQNRQDQKEAFVAKAGDTSTRNPGSLQLPASPYQVMAGTII
PAALVTGINSDLPGQVIANVSEAVYDTATGRHLLIPQGSRLIGRYDSQVAFGQRRVLLVW
TRLILPDTSSVALDRLPGIDPAGYAGLEDGVDWHWDHILAGAALSTLLGIGAELAAPESR
TDGNRIVIAGRESAQDTVNQVGQEITKRNMSIQPTLTIRPGFPMRVMVSKDLVLRPYQPL
FFQRGASQ
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggcgacgtccgacatgcccgatacggcgccggccgcagccccgaaggtcgaacccgaa
tccgtggccttgcgcgcttcgccgcgccccgtcacgcgcctgaaccgccgcatgctggcc
gtcggtgccggcgtcctggccgctgccgtgctcggcggcaccctgtggtcgctgcagtcg
aacaagcgcgagcgcaatctggccaccgagctgttcaacgtcgatcgcgtctctcgcgcc
gagaacctggaccggttgcccaaggactatgcgggaatcccgccggcattgaagccggcg
ccccccgtgctgggcgagccgctgccgggggatctagggcctgccatcgtcaaggcgcag
cagccgatggaaactcgaccgccgggcggtggcgtggatccggcgcaggccgagcgtctg
gcggccgaagaggcggcgcggtcttcggtgtttttccgtagcggtggcagcaacactggg
ccgaggccgggcgccgtacaggccgtcgctgacccttcggcgctcgcttcaggcaatcag
ccgttcaacccaatgggggccaccgccaccgcagcgcagccctcggatccgacgactgcg
cagaaccggcaggatcagaaggaggcgttcgtcgcgaaggcgggcgacacatccacgcgc
aatcccggaagcttgcagttgccggcgtcgccctaccaggtgatggcaggcacgatcatc
ccggcggcgctggtgaccgggatcaactccgacctgccgggccaggtcatcgccaacgtg
tccgaggcggtctacgacaccgccacgggtcgccatctactgattccgcagggctcgcgc
ctgatcggccgctacgacagtcaggtagccttcggccagcggcgcgtgctgctggtatgg
acgcggctgatcctgccggatacatcgtcggttgcgctcgaccgtctacctggcatcgac
cctgccggctacgctgggctcgaggatggcgtcgattggcattgggaccatatcctggcc
ggcgctgcgttgtctacgctgctagggatcggcgccgagctggcggcgcccgagagccgc
accgatggcaaccgaatcgtcatcgcgggacgtgagagcgcgcaggacacggtgaaccaa
gtcgggcaggagatcacgaagcgcaacatgagcatccagccgacgctgacgatccggccg
ggcttcccgatgcgggtgatggtgagcaaggacttggtgctgcggccgtatcagccgctg
ttcttccagcggggagcgtcgcaatga

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