KEGG   Rhodoferax koreensis: RD110_03180
Entry
RD110_03180       CDS       T04721                                 
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
rhy  Rhodoferax koreensis
Pathway
rhy02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rhy00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RD110_03180
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhy02044]
    RD110_03180
Enzymes [BR:rhy01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     RD110_03180
Secretion system [BR:rhy02044]
 Type IV secretion system
  Trb secretion system protein
   RD110_03180
SSDB
Motif
Pfam: T2SSE AAA_16 TrwB_AAD_bind Zeta_toxin AAA_28 nSTAND3 MMR_HSR1 ABC_tran CbiA DEAD AAA_7 AAA_22 Sigma54_activat KTI12 Dynamin_N ResIII GTP_EFTU AAA_30 ABC_ATPase AAA_19 IstB_IS21 RNA_helicase
Other DBs
NCBI-ProteinID: APW36337
UniProt: A0A1P8JRE5
LinkDB
Position
complement(666062..667102)
AA seq 346 aa
MPTPWRFLVNPPDPNGMDASLERRIRMLRTAMGPEIAAALEDPEVVEVLLNPDGSLWVDR
LGSGREATGAAIPPAVAERIIRLVAAHVRTEVHPGAPILSAELPETGERFLGVLPPVVRA
PSFAIRKRALHIMTLAHYVADGVMTEEQAAFLRRAVRERLNVVIAGGTSTGKTTLANALL
DEIAETRDRVLILEDTVELQCRSDDHVCMRTEPGVSTMADLVRATLRLRPDRIVVGEVRG
SEALDLLKAWGTGHPGGIATVHAGSAHGALTRLEQLVQEVSVTIPRALIAEAVNVIVFIA
GRGRSRRVREIARVVGHDSHGYQLDTELSFFPSLPPSNPSSTGDPS
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgccgacgccatggaggttcctcgtgaacccgcctgatccgaacggcatggacgcctcg
ttggagcggcgcatccgcatgctgcgcacagccatggggccggagattgcggccgcgttg
gaggaccccgaagtcgtcgaagtgctactgaacccggacggctcgctttgggtggaccgg
ctgggctcgggccgggaggccaccggcgcagcgattccgcccgcagtggccgaacggatc
atccggctggtggccgcgcacgtgcggaccgaggtgcatccgggcgcaccgatcctgtcg
gccgagctgcctgagactggtgaacgcttccttggggtgctgccgcccgtcgtgcgcgcg
ccgtcgtttgcgatccgcaagcgggcgctgcacatcatgacgctggcccattacgtggcc
gatggcgtgatgaccgaggagcaggcggcgttcctgcgccgcgcggtgcgcgagcgcctg
aacgtcgtcatcgcgggcggcaccagcaccggcaagaccacgctggccaatgccttgctc
gacgagatcgcagagacgcgcgaccgtgtgctgatcctcgaagacacggtggagctccag
tgccgcagcgacgaccatgtgtgcatgcgcaccgagccgggcgtgagcaccatggccgac
ctggtgcgtgccaccttgcggttgcgaccggaccgcattgtcgtcggcgaggtgcgcggc
tccgaagcactggacctgctcaaggcctggggcactggacaccccggcggcattgccacc
gtgcatgccggctcggcgcacggcgcgctcacgcggctggagcaactggtgcaggaggtc
agcgtgaccatcccgcgcgccctgattgccgaggcggtcaacgtcatcgtcttcattgcc
ggccgtggccgctcgcgccgcgtgcgagagatcgcgcgcgtcgtcggccatgacagccac
ggctaccagctcgataccgagctgtctttcttcccgtcgcttcctccttccaacccttct
tccacaggagatccttcatga

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