Rhodoferax koreensis: RD110_05540
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Entry
RD110_05540 CDS
T04721
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18902
multidrug efflux pump
Organism
rhy
Rhodoferax koreensis
Module
rhy_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhy02000
]
RD110_05540
01504 Antimicrobial resistance genes [BR:
rhy01504
]
RD110_05540
Transporters [BR:
rhy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RD110_05540
Antimicrobial resistance genes [BR:
rhy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
RD110_05540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Sec20
Motif
Other DBs
NCBI-ProteinID:
APW36719
UniProt:
A0A1P8JSJ3
LinkDB
All DBs
Position
complement(1151510..1154767)
Genome browser
AA seq
1085 aa
AA seq
DB search
MNLSKFFIDRPIFAGVLSLLILISGLLALRALPISEYPEVAPPQVVVRATYPGANPKVIA
ETVATPLEEQINGVEGMLYMGSQATTDGVMTLTVTFKLGTDPDKAQQLVQNRVSQAEPRL
PEEVRRLGITTIKSSPDLTMVVHLVSPNNRYDMTYLRNYAVLNVKDSLARIQGVGQVQIF
GGGDYAMRVWLDPQKVAQRGLSASDVVAAIRGQNIQAAAGVVGASPGLAGVDMQLSINAQ
GRLQSEEEFGDIIVKTSPDGAVTRLRDIGRLEMGAADYSLRSLLNNDSAVGMGVFQSPGS
NALDISSNVRKTMAELGKNMPEGVEFRIAYDPTQFVRASIESVVHTLLEAIALVVLVVIL
FLQTWRASIIPLLAVPVSVVGTFAVLHILGFSINALSLFGLVLAIGIVVDDAIVVVENVE
RNIEAGLSPREATYRAMREVSGPIIAIALVLVAVFVPLAFISGLTGQFYKQFAVTIAIST
VISAINSLTLSPALAALLLRGHDAPKDALTRFMDKTLGWLFRGFNKLFSRGSEAYSGGVK
RVIGRKALMMVIYLALIGVTFGLFKAVPSGFVPAQDKQYLIGFAQLPDGATLDRTEDVIK
RMGDIVKKNPNVEDAIAFPGLSINGFTNSSNSGIVFATLKPFAERKRADQSGGAVAGQLN
QAFGSIQDAFIVMFPPPPVAGLGTTGGFKLQLEDRGGLGYDEMDKAVKAFMAKAYQTPEL
AGMFTSWQVNVPQLYADIDRTKARQLGVPVTDIFDTMQIYLGSLYANDFNKFGRTYSVRV
QADAPYRARAEDVGLLKVRSSSGEMVPLSALMKVNASFGPERAMRYNGYLAADINGGPAP
GFSSGQAQDAINRIAAETLPKGMSYEWTELTYQEILAGNSAFLVFPLAILLVFLVLAAQY
ESLTLPLAIILIVPMGILAAMTGVWLHGGDNNVFTQIGLIVLVGLSAKNAILIVEFAREL
EFAGRTPIQAAIEASRLRLRPILMTSLAFIMGVLPLVLSTGAGAEMRSAMGVAVFAGMIG
VTAFGLFLTPVFYVLMRRLAGNRALKLHGTEPHTEEAFVSAHPVVHGGGGGSTHPLPAAP
LKALE
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgaatctctccaaattcttcatcgaccgcccgatcttcgcgggtgtgctgtcgctgctg
atcctgatctcgggtctgctggcgctgcgcgccctgccgatctcggaataccccgaagtc
gcgccgccgcaggtggtggtgcgcgccacctatcccggtgccaaccccaaggtgatcgcc
gagacggtggccacgccgctggaggaacagatcaacggcgtcgaaggcatgctctacatg
ggcagccaggccacgaccgacggcgtgatgacgctgaccgtgaccttcaagctcggcacc
gaccccgacaaggcgcagcaactggtgcagaaccgtgtctcgcaggccgagccgcgcctg
cccgaggaagtgcgccgcctgggcatcaccaccatcaagagttcgcccgacctgaccatg
gtggtgcacctggtgtcgcccaacaaccgctacgacatgacctacctgcgcaactacgcg
gtgctcaacgtcaaggacagcctggcacgcatccagggcgtgggccaggtgcagatcttc
ggcggcggcgactacgcgatgcgcgtctggctcgatccgcagaaggtggcgcagcggggc
ctctcggccagcgacgtggtggcggcgatccgcggccagaacatccaggccgccgcgggt
gtggtcggtgcttcgcccggcctggctggcgtggacatgcagctttcgatcaacgcccag
ggccgcctgcagagcgaggaagagttcggcgacatcatcgtcaagaccagcccagacggc
gccgtgacccggctgcgcgacatcggccgcctggaaatgggcgcggccgactactcgctg
cgctcgctgctgaacaacgactccgccgtgggcatgggcgtgttccagtcgcccggctcg
aacgcactcgacatctcctcgaacgtgcgcaagaccatggccgaactcggcaagaacatg
cctgagggcgtggagttccgcatcgcctacgatccgacgcagttcgtgcgcgcctccatc
gaatccgtggtccacaccctgctcgaagccatcgccctggtggtgctggtggtgatcctg
ttcctgcagacctggcgcgcttccatcatcccgttgttggccgtgccggtgtcggtggtg
ggcaccttcgccgtgctgcacatcctcggcttctcgatcaacgcgctctccctgttcggc
ctggtgctggccatcggcatcgtggtggacgacgccatcgtggtggtggagaacgtggag
cgcaacatcgaggccgggctttccccgcgcgaggccacctaccgcgccatgcgcgaggta
tcgggcccgatcatcgccatcgccctggtgctggtggcggtattcgtgccgctggccttc
atcagcggcttgaccggccagttctacaagcagttcgccgtcaccatcgccatctccacg
gtgatctcggccatcaactcgctgacgctgtcgcccgcgctggccgccctgctgctgcgc
ggccacgatgcgcccaaggacgcactgacgcgcttcatggacaagacgctgggctggctg
ttccgcggcttcaacaagctgttcagccgcggctccgaagcctacagcggcggcgtgaaa
cgcgtcatcggccgcaaggcgctgatgatggtgatctaccttgcgctgatcggcgtgacc
ttcggcctgttcaaggccgtgcccagcggcttcgtgccggcgcaggacaagcaatacctg
atcggctttgcgcagttacccgacggcgccacgctggaccgcaccgaggacgtgatcaag
cgcatgggcgacatcgtcaagaagaacccgaacgtggaagacgccatcgccttccccggc
ctgtcgatcaacggcttcaccaacagttcgaactcgggcatcgtgttcgccacgctcaag
cccttcgccgagcgcaagcgcgccgaccagagcggcggcgccgtggccggccagttgaac
caggccttcggcagcatccaggacgccttcatcgtgatgttcccgccgccacccgtggcc
ggcctgggcacgaccggcggcttcaagctgcaactcgaagaccgcggcggcctgggctac
gacgagatggacaaggccgtgaaagccttcatggccaaggcctaccagacgcccgagctg
gccggcatgttcaccagctggcaggtcaacgtgccgcagctgtacgccgacatcgaccgc
accaaggcgcgccagctcggcgtgccggtgaccgacatcttcgacaccatgcagatctac
ctcggcagcctgtacgccaacgacttcaacaagttcggccggacctacagcgtgcgtgtg
caagccgacgcgccctaccgcgcccgcgccgaagacgtgggcctgctcaaggtgcgctcg
agctcgggcgagatggtgccgctgtcggcgctgatgaaggtcaacgccagcttcggcccg
gaacgcgccatgcgctacaacggctacctcgccgccgacatcaatggtggcccggcgccg
ggtttctcctcgggccaggcccaggacgcgatcaaccgcatcgcggccgagacgctgccc
aagggcatgagctacgagtggaccgaactcacctaccaggaaatcctggccggcaattcc
gcgttcctggtgttcccgctggcgatcctgctggtgttcctggtgctggccgcgcagtat
gaaagcctgacgctgccgctggccatcatcctgatcgtgccgatgggcatcctggcggcg
atgaccggtgtgtggctccacggcggggacaacaacgtgttcacgcagatcgggctcatc
gtgctggtcgggctgagtgcgaagaacgcgatcctgatcgtggaattcgcccgcgagctc
gagttcgcaggtcgcacgccgatccaggcggccatcgaggccagccggctgcgtttgcgc
ccgatcctgatgacctcgctggccttcatcatgggggtgctgcccctggtgctgtccacc
ggcgccggcgcggagatgcgctcggccatgggtgtggcggtgttcgccgggatgatcggc
gtgacggccttcggcctgttcctgacaccggtgttctacgtgctgatgcgccgcctggcg
ggcaaccgtgcgctgaagctgcacggcaccgagccgcacaccgaagaggcttttgtgtcg
gcgcatccagtcgtgcacggcggcggcggtggttcgacccacccgctgcccgcggcaccg
ctgaaggcgctggaatag
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