Rhodoferax koreensis: RD110_06590
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Entry
RD110_06590 CDS
T04721
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhy
Rhodoferax koreensis
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhy03400
]
RD110_06590
Enzymes [BR:
rhy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RD110_06590
DNA repair and recombination proteins [BR:
rhy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RD110_06590
Prokaryotic type
RD110_06590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
APW40519
UniProt:
A0A1P8K3D3
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All DBs
Position
complement(1400042..1401520)
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AA seq
492 aa
AA seq
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MWFRRDLRAFDNAALYHALKECRQLHCVFVFDREILDPLIEKGLTADRRVEFILASVAEL
DASLRTLAGDEASTHGLLVRHAVAREAIPALAHELHAQAVFANHDYEPDAVERDTMVRGA
LAHQGISFVTFKDHVIFERDELLTQQGRAYGVFTPYKNAWLKKVDDFYLKPYPVAKYKAS
LAAHPANVHVALPTLALLGFQPTNLSTLKIPTGASGGEQLFDEFFERMDRYGATRDFPAV
KGPSYLGVHLRFGTVSVRQLAAVAHKLAAKGSEGAAVWLGELIWRDFYAQIIHHFPHAAK
GAFKPEYDAIKWEHGKHAEALFAAWCEGRTGYPLVDAAMAQINQTGYMHNRLRMVVASFL
VKDLGIDWRWGERYFAEQLNDFDLASNNGGWQWASSSGCDAQPYFRIFNPQSQSEKFDAE
GKFIRRYLPQLAALPDKLIHAPWQASEIELLAANVELGKTYPKPIVDHAEAREKTLARYA
VVKKTATLPRRT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtggttccggcgcgacctgcgcgcgttcgacaacgccgcgctctaccacgcgctcaag
gaatgccgccagctgcactgcgtcttcgtgttcgaccgcgaaatcctcgacccgctgatc
gagaagggcctgacggccgaccgccgcgtcgaattcatcctggccagcgtggccgaactc
gatgccagcctgagaacgctggcgggggacgaggcctcgacccacggcctgctcgtacgc
cacgccgtcgcgcgggaggcgattcccgcgctggcccatgaactgcatgcgcaggcggtg
ttcgccaaccacgactacgaacccgatgcggtcgagcgcgacaccatggtgcgcggcgcc
ctggcgcaccagggcatttccttcgtgaccttcaaggaccatgtgatcttcgagcgcgac
gaactgctgacgcagcagggccgcgcctatggcgtgttcacgccgtacaagaacgcctgg
ctcaagaaggtcgacgacttctacctcaagccttatccggtcgccaagtacaaggccagc
ctcgccgcgcatccggcgaacgtgcacgtggcgttgccgacgctggcgctgctcggcttc
cagccgacgaacctgtcgacgctgaagattccgaccggcgcgagcggcggcgagcagctg
ttcgacgaattcttcgaacgcatggaccgctacggcgccacgcgcgacttccccgcggtc
aaggggccgagctacctcggcgtgcacctgcgcttcggcacggtgtcggtgcgccaactc
gcagccgtggcgcacaagctcgcggccaagggttcggaaggtgcggcggtgtggctcggc
gagctcatctggcgcgatttctacgcgcagatcatccaccacttcccgcatgcggccaag
ggcgcgttcaagcccgaatacgacgccatcaagtgggagcatggcaaacacgccgaggcc
ctgttcgccgcctggtgcgagggccgcaccggttatccgctggtggatgcggccatggcc
cagatcaaccagaccggctacatgcacaaccggctgcgcatggtggtggcgagtttcctg
gtgaaggacctcggcatcgactggcgctggggcgagcgttatttcgccgagcagctcaac
gatttcgacctcgcctccaacaacggcggctggcagtgggccagttccagcggctgcgac
gcccagccgtatttccgcatcttcaacccacagagccagagcgagaaattcgacgccgag
ggcaagttcatccggcgctatcttccgcagctcgcggccctgcccgacaagctgatccat
gcgccctggcaggcgtccgaaatcgaattgctcgccgccaacgtcgaactcggcaaaacc
taccccaaacccatcgtcgaccacgccgaggcgcgcgagaagacgctggcccgttatgcg
gtggtgaagaagaccgccacgctgccgcggcgaacctga
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