Rhodoferax koreensis: RD110_07185
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Entry
RD110_07185 CDS
T04721
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rhy
Rhodoferax koreensis
Pathway
rhy00020
Citrate cycle (TCA cycle)
rhy00190
Oxidative phosphorylation
rhy00650
Butanoate metabolism
rhy00720
Other carbon fixation pathways
rhy01100
Metabolic pathways
rhy01110
Biosynthesis of secondary metabolites
rhy01120
Microbial metabolism in diverse environments
rhy01200
Carbon metabolism
Module
rhy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhy_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RD110_07185
00650 Butanoate metabolism
RD110_07185
09102 Energy metabolism
00190 Oxidative phosphorylation
RD110_07185
00720 Other carbon fixation pathways
RD110_07185
Enzymes [BR:
rhy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RD110_07185
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
FAD_binding_3
GIDA
Pyr_redox_3
Lycopene_cycl
FAD_oxidored
SPESP1
Motif
Other DBs
NCBI-ProteinID:
APW37011
UniProt:
A0A1P8JTH9
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Position
complement(1527966..1529774)
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AA seq
602 aa
AA seq
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MSYTKANITKRKFDVVIIGAGGSGMRAALELSRAGLNVASLSKVFPTRSHTVAAQGGVSA
SLGNMSEDNWHYHFYDTIKGSDWLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHAMLHTLYQQNVKAKTNFFVEWMALDLIRDADG
DVVGVTALEMETGDLHILQAKTVLLATGGAGRIFGASTNAFINTGDGLGMAARSGIALQD
MEFWQFHPTGVAGAGVLLTEGCRGEGAILRNADGERFMERYAPTLKDLAPRDFVSRCMDQ
EIKEGRGCGPNKDYIVLDMTHLGVETIAKRLPSVLEIGHNFANVDITKEPIPVVPTIHYQ
MGGIPTNINGQVITQKDGIDNAVVNGLYAVGECACVSVHGANRLGTNSLLDLLVFGKAAG
RHIVEFNNRNKEHKPLPADAADKTLARLNQLDSSTDGTYSQDIAGDIRAAMQLHAGVFRT
QASMDEGVKKIAEIRSRVASVTLKDKSKVFNTARIEALEVDNLIEVAQATMVSAAARREC
RGAHTVYDYEHPADHAEFPLGRNDKEWMKHTLWYSEGNRLAYKPVNLKPLTVDSVPPKVR
TF
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaccaaagccaacatcaccaagcgcaagttcgacgtcgtcatcatcggcgcc
ggcggctccggcatgcgcgccgccctcgaactgtcccgcgccggcctcaacgtggcctcg
ctgtccaaagtgtttcccacccgcagccacaccgtggccgcgcaaggcggcgtctccgcc
tcgctgggcaacatgtccgaagacaactggcactaccacttctacgacaccatcaagggc
tccgactggctcggcgaccaggacgcgatcgaattcatgtgccgcgaagccccgaaggtg
gtctatgaactggaacacttcggcatgccgttcgaccgcaaccccgacggcacgatctac
cagcgcccgttcggcggccacaccgccaactacggcgagaaacccgtgcagcgcgcctgc
gccgcggcagaccgcaccggccacgccatgctgcacacgctgtaccagcagaacgtcaag
gccaagaccaacttcttcgtcgaatggatggcgttggacctgatccgcgacgccgacggc
gacgtggtcggcgtgaccgctctcgagatggaaaccggcgacctgcacatcctgcaggcc
aagaccgtgctgctggccaccggtggtgccggccgcatcttcggcgcatcgaccaacgcc
ttcatcaacaccggcgacggcctgggcatggcggcacgctcgggcatcgcgctgcaggac
atggagttctggcagttccaccccaccggcgtcgccggcgccggcgtgctgctgaccgaa
ggctgccgcggcgaaggcgcgatcctgcgcaacgccgatggcgaacgcttcatggagcgt
tatgcgcccacgctgaaggatctggcaccgcgcgacttcgtctcgcgttgcatggaccag
gaaatcaaggaaggccgcggctgcggtccgaacaaggactacatcgtcctggacatgacc
cacctgggcgtggagaccatcgccaagcgcctgcccagcgtgctggagatcggccacaac
ttcgccaacgtcgacatcaccaaggagccgatcccggtggtgcccacgatccattaccag
atgggcggcatcccgaccaacatcaacggccaggtcatcacccagaaggacggtatcgac
aacgccgtcgtcaacggcctctacgccgtgggcgagtgcgcctgcgtgagcgtgcacggc
gcgaaccgcctgggcacgaactcgctgctcgacctgctggtgttcggcaaggccgccggc
cgccacatcgtcgaattcaacaaccgcaacaaggagcacaagcctctgccggcggatgcg
gccgacaagaccctggcgcgcctgaaccagttggacagctcgaccgacggcacgtattcg
caggacatcgccggcgacatccgcgccgcgatgcaactgcacgccggcgtgttccgcacc
caggccagcatggacgaaggcgtgaagaagatcgccgagatccgcagccgcgtggccagc
gtcacgctgaaggacaagtccaaggtgttcaacaccgcgcgcatcgaggcgctcgaggtc
gacaacctgatcgaagtggcgcaggccacgatggtctcggccgcggcgcgccgcgaatgc
cgtggcgcccacacggtgtacgactacgaacacccggccgaccatgcggaattcccgctc
ggccgcaacgacaaggagtggatgaagcacacgctgtggtacagcgaggggaaccggctg
gcctacaagccggtcaacctcaagccgctcacggtggacagcgtgccgccgaaggtccgt
accttctga
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