Rhodoferax koreensis: RD110_07435
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Entry
RD110_07435 CDS
T04721
Name
(GenBank) murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
rhy
Rhodoferax koreensis
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhy01011
]
RD110_07435
Enzymes [BR:
rhy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RD110_07435
Peptidoglycan biosynthesis and degradation proteins [BR:
rhy01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RD110_07435
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Paralog
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Motif
Pfam:
SLT_2
PG_binding_1
Glucosaminidase
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
APW37048
UniProt:
A0A1P8JTH8
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Position
complement(1586503..1587795)
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AA seq
430 aa
AA seq
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MKHRIHSSLGQVRLLYLAGAAWLAGCATAPPHPASPPVPPSSAAPVPSQLAPAGDAVRAQ
GFARWIEDFRVTARAAGISDTILREAFDGVQELPRVVAADRAQPEFTRTVWDYLDTAVSP
QRVARGQDKWLQVRAEADAAAARYGVPANILIAIWGMESNYGSNYGDIPTIDALATLGFE
GRREEWARGQLLAALQILQNGDIDRGHMIGSWAGAMGQTQFLPSNFLAYAVDADGDGRRD
IWGSMADVLASTANFLARSGWQADQPWGTEVQLPPGFDVARADATVRQPAALWTAEGLRS
ADGSALPPLTDAEVLLPAGARGPAFLVGPSFRSILRYNNSVSYALAVSLLSQRLAGGAEV
QAAWPRDLQAPTRSQVLALQTALNKRGFASGTPDGMMGPATRGAIRAYQRSIGVPADGYP
DPELLRRLRE
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaccgcatccattcatcgcttggtcaggtccggctgctctaccttgccggtgct
gcatggctggccggctgtgccacggcaccgccccacccggcaagcccgcctgtaccaccg
tcgtctgccgcgcccgtcccaagccagctcgccccagccggcgacgccgtgcgggcccag
ggcttcgcccgctggatcgaggacttccgggtcacggcgcgcgccgcgggcatcagcgac
accatcctgcgcgaggcgttcgatggtgtgcaggaactgccgcgtgtggtggccgccgac
cgtgcgcagcccgaattcacgcgcacggtgtgggactatctcgacaccgccgtgtcgccg
caacgcgtcgcccgcggacaggacaaatggctgcaggtgcgggccgaggccgatgcggcg
gcggcgcgttacggcgtgccggccaacatcctgatcgccatctggggcatggagagcaac
tacggcagcaactatggcgacatcccgaccatcgacgccctggccacgctgggcttcgag
ggccggcgtgaggaatgggcacgcggccagttgctcgcggccctgcagatcctgcagaac
ggcgacatcgaccgtggccacatgatcggctcatgggcgggcgccatgggccagacgcag
ttcctgccgtccaacttcctggcctatgcggtggacgccgacggcgacggccggcgcgac
atctggggcagcatggccgacgtgctggcctctaccgccaactttctggcccgctccggc
tggcaggccgaccaaccctggggcacggaagtccagttgccgcccggcttcgacgtggcc
cgggccgatgccactgtgcgtcaaccggccgcgctatggacggccgagggtttgcgcagc
gccgatggcagcgcactgccaccgttgaccgatgcggaagtcctcctgcccgcaggcgcg
cgtggcccggcgttcctggtcggcccgagtttccgctccatcctgcgctacaacaactcg
gtgagctacgcactcgccgtcagcctgctgtcgcaacgcctggcgggtggcgcagaagtg
caggcggcctggccgcgtgatctgcaggcaccgacacgcagccaggtgctcgcactgcag
acggcactgaacaagcgtggttttgcgagcggcacgcccgacggcatgatgggcccggcc
acgcgcggcgcgatccgcgcctaccagcgcagcatcggcgtgccagcggatggttacccg
gatcccgaactgctgcgccggctgcgggaatga
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