Rhodoferax koreensis: RD110_07830
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Entry
RD110_07830 CDS
T04721
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rhy
Rhodoferax koreensis
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhy03032
]
RD110_07830
03400 DNA repair and recombination proteins [BR:
rhy03400
]
RD110_07830
Enzymes [BR:
rhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RD110_07830
DNA replication proteins [BR:
rhy03032
]
Prokaryotic type
DNA Topoisomerases
RD110_07830
DNA repair and recombination proteins [BR:
rhy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RD110_07830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
APW37115
UniProt:
A0A1P8JTQ8
LinkDB
All DBs
Position
complement(1674541..1677210)
Genome browser
AA seq
889 aa
AA seq
DB search
MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRHMLVDGQGNFGSVDGDNAAAM
RYTEIRLAKIAHELLADLDKETVDFGPNYDGSEKEPLVLPTRLPNLLVNGSGGIAVGMAT
NIPPHNLNEVVDACLHLLRNPDASVDDLMEIIPAPDFPTAGIIYGINGVKDGYRTGRGKV
VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALINGQPKLCNLKDLVEVFLEHRRE
VVTRRTVFNLRKARERGHVLEGLAVALANIDDFIRIIRESPTPPVAKVELMNRPWDSKLV
REMLTRTRADGGIVNADDYRPDGLDRAFGMGADGLYRLSDTQAQEILQMRLQRLTGLEQD
KIVAEYKEVMAEIEDFLDILAKPERVSVIIGEELTAIKTEFGQTKLGARRSLVEHSSFDL
STEDLITPTDMVVTLSHSGYIKSQPLSEYRAQKRGGRGKQATATKEDDWVDQLFIANTHD
YLLCFSNRGRLYWLKVWEAPQGSRGSRGRPIVNMFPLQEGEKINVVLALTGANRTFPADH
YVFMATSMGTVKKTPLEDFSNPRKAGIIAVDLDPGDFLIGAALTDGEHDVMLFSDGGKAV
RFDENDVRPMGRNARGVRGMMLEEGQSVIAMLVAEDEAQSVLTATLNGYGKRTSITEYTR
HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVSEIRELGRATQGVT
LIGLDEGSKLSGLQRIVENDANVPAADAESGGGETAAPDTGEAPDAPDA
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgacccagttcgccaaagaaaccctgcccatcagccttgaagaggagatgcggcgcagc
tacctcgattacgcgatgagcgtgatcgtgggccgggcattgcctgatgcacgcgatggc
ctgaagccggtgcaccgccgggtgctgttcgccatgcacgaactgaacaacgactggaac
cgcgcatacaagaagtcggcgcgcatcgtgggcgacgtgatcggcaagtaccacccgcac
ggcgaccagtcggtgtacgacaccatcgtgcgcatggcgcaggatttctccatgcgccac
atgctggtcgatggccagggcaacttcggctcggtcgacggcgacaacgccgcggcgatg
cggtataccgaaatccgcctggccaagatcgcgcatgaactgctggccgacctcgacaag
gaaaccgtcgatttcgggccgaactacgacggcagcgagaaggaaccgctggtgctgccc
acgcggctgcctaatctattagtgaacggctcgggcggcatcgccgtgggcatggccacc
aacattccgccgcacaacctgaacgaggtggtcgacgcctgcctgcatctgctgcgcaac
ccggacgcttcggtcgacgacctgatggaaatcattccggcgcccgacttccccacggcc
ggcatcatctacggcatcaacggcgtgaaggacggctaccgcaccggccgcggcaaggtg
gtcatgcgcgccaagtgccacttcgaggacatcgaccgcggccagcgccaggcgatcatc
gtcgacgagctgccctaccaggtcaacaagaagacgctgcaggagcgcatggccgaactg
gtgcacgagaagaagatcgagggcatcagccacatccaggacgagtccgacaagtccggc
atgcgactcgtgatcgaattgaagcgcggcgaagtgcccgaggtggtgctgaacaacctc
tacaagcagacgcagctgcaggacaccttcggcatgaacatggtggccctgatcaacggc
cagcccaagctctgcaacctgaaggacctggtcgaggtgttcctcgaacaccggcgcgaa
gtggtcacgcggcgcacggtgttcaacctgcgcaaggcccgcgagcgcggccacgtgctc
gaaggcctggcggtggcgctggccaacatcgacgacttcatccgcatcatccgcgagtcg
cccacgccgcccgtggccaaggtcgaactcatgaaccgcccctgggacagcaagctcgtg
cgcgagatgctcacccgcacgcgggccgacggcggcatcgtcaacgccgacgactaccgg
cccgacggcctggaccgggccttcggcatgggcgccgacggcttgtaccgcctctccgac
acgcaggcgcaagagattttgcagatgcgcctgcagcgcctgaccggcctggagcaggac
aagatcgtcgccgaatacaaggaggtgatggccgaaatcgaggacttcctcgacatcctg
gccaagcccgaacgcgtgtcggtcatcatcggcgaggaactcaccgccatcaagaccgaa
ttcggccagaccaagctcggcgcgcgccgcagcctggtggagcacagctcgttcgacctg
agcaccgaagacctgatcacgccgacggacatggtcgtcacgctgtcacacagcggctat
atcaagagccagcccttgtccgaataccgtgcgcagaagcgcggcggccgcggcaagcag
gccacggcgacgaaggaagacgactgggtcgaccaactgttcatcgccaacacgcacgac
tacctgctgtgcttctccaaccgcggccggctctactggctgaaggtgtgggaagcgccg
cagggctcgcgcggctcgcgcggccggcccatcgtcaacatgtttccgctgcaggaaggc
gagaagatcaacgtcgtgctcgcgctcaccggcgccaaccgcaccttccccgccgaccac
tatgtgttcatggcaaccagcatgggcacggtgaagaagaccccgctggaagatttcagc
aacccgcgcaaggccggcatcattgccgtcgacctcgatccgggcgacttcctgatcggc
gccgccctcaccgatggcgaacacgacgtgatgctgttctccgacggcggcaaggccgtg
cgcttcgatgaaaacgacgtgcgccccatgggtcgcaatgcccgcggcgtgcgcggcatg
atgctcgaagaaggccagagcgtgatcgccatgctggtggccgaggacgaagcccagagc
gtgctcaccgccacgctgaacggctacggcaaacgcaccagcatcaccgaatacacgcgc
cacggccgcggcaccaagggcatgatcgcgatccagcagagcgagcgcaacggcaaggtc
gtggccgccacgctggtgcatgcggacgacgagatcatgctgatcaccgacaagggcgtg
ctggtgcgcacccgcgtcagcgagatccgcgaactcggtcgcgccacccagggcgtcacc
ctcatcgggctggacgaaggctccaagctcagcggtctgcagcgcatcgtggaaaacgac
gcgaacgtgcctgcggcagatgccgaatccggcggcggcgaaacggcggcccccgatacc
ggcgaagcccccgacgcgccagacgcctga
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