Rhodoferax koreensis: RD110_09065
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Entry
RD110_09065 CDS
T04721
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
rhy
Rhodoferax koreensis
Pathway
rhy02010
ABC transporters
rhy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RD110_09065
03070 Bacterial secretion system
RD110_09065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhy02000
]
RD110_09065
02044 Secretion system [BR:
rhy02044
]
RD110_09065
Transporters [BR:
rhy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RD110_09065
Secretion system [BR:
rhy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RD110_09065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_22
ABC_ATPase
Zeta_toxin
AAA_21
AAA_16
NB-ARC
nSTAND3
AAA_29
MobB
MoeA_C
AAA_30
TsaE
PRK
Motif
Other DBs
NCBI-ProteinID:
APW40580
UniProt:
A0A1P8K3J3
LinkDB
All DBs
Position
1949399..1951543
Genome browser
AA seq
714 aa
AA seq
DB search
MTERFPHSTIQCLAAIAQHHGLPINPERLIEDYALAGEEPPPATVLRIASDIGLKAKADK
LTWASLQAQGGVFPLIARLADNTAVIVVSAHSNGTSEVAILNPLADRPTEVLSVGQEKFC
QLWHGDVFLLKRQNNLPEPSRKFGFRWFIPEIMKQKAALRDIAIAAIAMHFLALASPIFF
QLVIDKVLVHQSMSTLWVLGVGIVMALVFDALFGFLRQILTLSASNKIDMRLTRRTFAHL
LSLPIDYFETTTAGVITRHMQQVEKIRAFLTGRMFFSVLDATSLIIFLPILFAYSMKLAL
ITLAFTAMICLVVAAMVPSFNRRLRDLYNAEGERQSMMVETIHGMRTVKALAIEPAQRRL
WDQRSAQSINMHFRVGKIAITGGAITDFLGKLLPVVIIVIGAQDVFDQTLTVGALIGFQM
LSGRVVAPLIAIVGLVNEYQETALSVRMLGEVMNRPSEGRAGAGGLRPELAGEISFDEVT
FRYPGSSNAALDRASFTIQAGSVVGIVGRSGSGKTTLTKLIQGLYGVQEGIVRFDRTDAR
EIELAHLRRQIGVVLQENFLFRGTVRENISAARPEATFEEIVEAAEAAGAAEFIERLPQG
YNTMLEENASNLSGGQKQRLSISRSLLTKPRILVLDEAASALDPESEAIFIRNLSKIAVG
RTVVMISHRLSTLVNANAILVMQQGRLVDSGKHAELLTRCETYQHLWNQQTSHL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgacagagcgcttccctcattccaccatccagtgcctcgccgcgattgcccaacaccat
ggtctgccgatcaatcctgaacgtttgatcgaggactatgcgctggcgggggaggagccg
ccaccggcgacggtgctgcgcatcgcgtccgacatcgggctcaaggccaaggccgacaag
ctcacctgggccagcctgcaggcccagggcggcgtgtttccgctgatcgcgcggctggcg
gacaacacggcggtgatcgtggtgagcgcgcattccaacggaacgagcgaggtggccatc
ctcaatccgctggcggaccggccgaccgaggtgctcagcgtcggacaggagaagttctgc
cagctctggcacggcgacgtgttcctgctcaaacgccagaacaacctgcccgagcccagc
cgcaagttcggctttcgctggttcatcccggagatcatgaaacagaaggcggcgctgcgc
gacatcgccatcgccgccatcgccatgcatttcctggccctggcctcgccgatcttcttc
cagctggtgatcgacaaggtcctcgtgcaccagagcatgtccacgctgtgggtgctgggc
gtgggcatcgtgatggccctggtgttcgacgccctgttcggcttcctgcgacagatcctc
acgctgtcggcgagcaacaagatcgacatgcggctcacccgccgcaccttcgcgcacctg
ctgtcgctgccgatcgactacttcgagacgacgacggccggcgtgatcacgcgccacatg
cagcaggtcgagaagatccgcgccttcctcaccggccgcatgttcttttcggtgctggac
gcgacctcgctgatcatcttcctgccgatcctgttcgcgtattcgatgaagctggcgctg
atcacgctggccttcaccgcgatgatctgcctcgtcgtcgcagccatggtgccgagtttc
aaccgaagactgcgcgacctgtacaacgccgagggtgagcgccagtcgatgatggtcgag
accatccacggcatgcgcacggtgaaggcgctggccatcgagccggcgcagcgccgtctg
tgggaccagcgttcggcgcagtcgatcaacatgcatttccgcgtcggcaagatcgccatc
accggtggtgccatcaccgacttcctgggcaagctgctgccggtggtgatcatcgtgatc
ggcgcgcaggacgtgttcgatcagacgctcacggtgggtgcgctgatcggcttccagatg
ctgtcgggccgcgtggtggcgccgctgatcgccatcgtcggcctggtcaacgaataccag
gagacggcgctgtcggtgcgcatgctcggcgaggtgatgaaccggccgtccgaaggccgt
gccggtgccggcgggctacggccggagctggccggcgagatttccttcgacgaggtcacc
ttccgttatccgggctccagcaacgccgcactcgaccgcgcgagcttcaccatccaggct
ggctcggtggtgggcatcgtgggccgcagcggttcgggcaagaccacgctgaccaaattg
atccaggggctttacggcgtgcaggagggcatcgtgcggttcgaccggaccgatgcgcgc
gagatcgaactcgcgcacctgcggcggcagatcggcgtggtgctgcaggagaacttcctg
ttccgcggcacggtgcgcgagaacatctccgcggctaggcccgaagccactttcgaggag
atcgtcgaggccgccgaagcggcaggcgcggccgagttcatcgaacgcctgccccagggc
tacaacaccatgctcgaggagaacgcgtccaatctttctggcgggcagaagcagcggctg
tcgatttcgcgttccttgctgaccaagccgcgcatcctggtgctcgacgaggccgcgagc
gcgctcgaccccgagagcgaggccatcttcatccgcaacctgtcgaagatcgccgtgggc
cgcaccgtggtgatgatctcgcaccgcctgtccacgctggtcaatgccaacgccatcctg
gtgatgcagcaggggcgactggtcgatagcggcaaacacgccgagctcctgacgcgttgc
gaaacctaccaacacctatggaaccagcaaacaagccacctgtga
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