Rhodoferax koreensis: RD110_10620
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Entry
RD110_10620 CDS
T04721
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rhy
Rhodoferax koreensis
Pathway
rhy00541
Biosynthesis of various nucleotide sugars
rhy01100
Metabolic pathways
rhy01250
Biosynthesis of nucleotide sugars
Module
rhy_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RD110_10620
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rhy01005
]
RD110_10620
Enzymes [BR:
rhy01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
RD110_10620
Lipopolysaccharide biosynthesis proteins [BR:
rhy01005
]
Lipid A
RD110_10620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Phage_L5_gp82
Motif
Other DBs
NCBI-ProteinID:
APW37582
UniProt:
A0A1P8JV14
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All DBs
Position
complement(2259542..2260396)
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AA seq
284 aa
AA seq
DB search
MKLCGFDIGLDKPFFLIAGPCVIESEQLQMDVAGTLKEITSALSIPFIFKSSFDKANRSS
GNTFRGPGIDRGLEILAKVKRELGVPVLTDIHDESQIAQVSGVVDVLQTPAFLCRQTDFI
RAVAQSGLPVNIKKGQFLAPHDMKNVIDKARAAAREKGLNEDNFMACERGASFGYNNLVS
DMRSLSIMRETNAPVVFDATHSVQLPGGQGTSSGGQREMVPVLARAAVAVGVAGLFMETH
PNPAVAMSDGPNAVPLKHMKALLETLVALDAVTKKTPFLETNFE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttgtggtttcgacatcggcctggacaagcctttcttcctcatcgcgggcccg
tgtgtcatcgagtccgaacagttgcaaatggacgtggccggaacgctcaaggaaatcacc
tcggccctcagcatcccgttcatcttcaagagcagcttcgacaaggccaaccgcagcagc
ggcaacaccttccgcggcccgggcatcgaccgtggcctggagatcctggccaaggtgaag
cgcgaactcggcgtgccggtgctgaccgacatccacgacgaatcgcagatcgcgcaggtt
tccggcgtggtcgacgtgctgcagacgcccgccttcctgtgccgccagaccgatttcatc
cgtgccgtggcccagtcgggcctgccggtgaacatcaagaagggccagttcctcgcgccg
cacgacatgaagaacgtgatcgacaaggcccgcgccgccgcgcgcgaaaaaggcctgaac
gaggacaacttcatggcctgcgaacgcggcgccagcttcggctacaacaacctggtgagc
gacatgcgcagcctgtccatcatgcgcgagacgaacgcaccggtggtcttcgacgccacg
cattcggtgcagctgcccggcggccagggcacgagttccggtggccagcgcgagatggtg
ccggtgctggcgcgtgcggccgtggccgtgggcgtggccgggctgttcatggaaacccat
cccaaccccgcggtggcgatgagcgacggcccgaacgccgtgcccttgaaacacatgaag
gcgctgctcgaaaccctggtggcgctcgatgccgtgacgaaaaagaccccgttcctggag
accaacttcgaatga
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