Rhodoferax koreensis: RD110_12830
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Entry
RD110_12830 CDS
T04721
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
rhy
Rhodoferax koreensis
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_2
Mg_chelatase
AAA_3
FleQ
HTH_50
AAA_22
HTH_30
AAA_16
HTH_23
HTH_28
cREC_REC
AAA_7
MCM
DUF815
Glyco_transf_4
nSTAND3
TIP49
Motif
Other DBs
NCBI-ProteinID:
APW37967
UniProt:
A0A1P8JW37
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Position
complement(2735442..2736809)
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AA seq
455 aa
AA seq
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MARLLIVDDDAAFRETLAETLHSLGHEVLACASGAEGLEALQRNRCDAVFLDHRMPGMDG
LQTLAAMRARLSRLPPVIVLTAFASGGNTIEAMRLGAFDHLAKPISRQAVIDVLARALRA
ETPAERAAPAASEAEDDATGLIGVSDAMREVHKRIGLAAASSAPVLVLGETGTGKEMVAR
ALHRHSARAGAPFVAINCAAIPKDLLESELFGHVRGAFSGATADRPGCFRAADGGVLLLD
EIGDMAPAVQAKILRVLQEGEVTPLGSHRTVRVDVRVIAATHRDLAAAVRDGRFREDLLY
RLDVLTIRLPPLRERLADILPLAEHFLRRAAADDHDAPAKLLSNDAAQWLLRHPWPGNVR
ELRNLMARCQALVRHRVIGAEDLGPAMDQADRAQAGTALPADWLDGELPAAVERLERLLI
AHALARSQGNRAEAARSLGIHRQLLYRKMAQYQLD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgactgctgatcgtcgacgacgatgcggccttccgcgaaaccctggccgagacg
ctgcacagcctcggccatgaggtcctggcctgcgccagcggtgcagaagggctagaggcg
ctgcagcgcaatcgctgcgacgccgtcttcctcgaccaccgcatgcccggcatggacggg
ctgcagacgctcgcggccatgcgtgcccggctcagccgcctgccaccggtgatcgtgctc
accgccttcgccagcggcggcaacaccatcgaggccatgcgcctgggcgccttcgaccac
ctggccaagccgatcagccgccaggcggtgatcgacgtgctggcgcgcgcgctgcgtgcc
gagacgccggccgagcgcgccgcgccggcagcctccgaagccgaagacgacgccaccggc
cttatcggcgtcagcgacgcgatgcgcgaagtgcacaagcgcatcggcctggccgccgcc
agcagcgcgccggtgctggtgctgggggagaccggcaccggcaaggaaatggtggcgcgc
gccctgcaccgccattcggcccgggccggcgcgcccttcgtcgccatcaactgcgcggcg
atcccgaaggatctgctggagagcgagctcttcggccatgtgcgcggcgcgttcagcggc
gccaccgcggaccgccccggctgtttccgcgcggccgatggcggcgtgctgctgctcgac
gagatcggcgacatggcgcccgccgtacaggccaagatcctgcgcgtgctgcaggaaggc
gaggtcacgccgctgggcagccaccggaccgtgcgtgtcgacgtgcgggtgatcgccgcc
acccaccgcgacctggccgccgccgtgcgcgacggccgctttcgtgaggacctgctgtac
cggctcgacgtgctgacgatccggctgccgccgctgcgcgagcggctggccgacatcctg
ccgctggccgaacatttcctgcgccgcgctgccgccgacgaccacgacgcgccggccaag
ctgctctcgaacgacgccgcccaatggctgctgcgccacccctggcccggcaacgtgcgc
gaactgcgcaacctgatggcgcgctgccaggccctggtgcggcaccgcgtcatcggtgcg
gaagacctggggcccgccatggaccaggccgatcgagcccaggccggcacggccctgccg
gccgactggctcgatggcgaactgcccgccgcggtggagcggctcgaacgcctgctcatc
gcacacgccctggcgcgcagccagggcaaccgcgccgaggccgcacgcagcctcggcatc
caccgccaattgctctaccgcaagatggcacagtaccagctcgattga
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