KEGG   Rhodoferax koreensis: RD110_14775
Entry
RD110_14775       CDS       T04721                                 
Name
(GenBank) Hcp1 family type VI secretion system effector
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
rhy  Rhodoferax koreensis
Pathway
rhy03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RD110_14775
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhy02044]
    RD110_14775
Secretion system [BR:rhy02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RD110_14775
SSDB
Motif
Pfam: T6SS_HCP Tsi3
Other DBs
NCBI-ProteinID: APW38296
UniProt: A0A1P8JX17
LinkDB
Position
complement(3187733..3188218)
AA seq 161 aa
MSQDIFLKIAGIEGESLDAAHKNEIEVLAFNWRVLQESTMHAGSGGGAGKATVEDLEFDH
YVDRSSPNLMKYCLTGKHVAEAKLTVRKAGGNPLEYLKFTFTDVIITSVSPFGSNTDELR
VKERVRLSFSKIKQEYAVQNAQGGSGGAVTAGYDIKGNKES
NT seq 486 nt   +upstreamnt  +downstreamnt
atgtcacaagatatttttctgaaaatcgccggtatcgaaggcgaatcgctcgacgccgcc
cacaagaacgaaatcgaggttctcgccttcaattggcgagtcctgcaggaatccaccatg
cacgccggctccggcggcggcgccggcaaggcgacggtggaggatctcgagttcgatcac
tacgtcgaccgttccagtcccaacctgatgaagtattgcctgaccggcaagcacgtggcc
gaagccaagctgacggtgcgcaaggccggtggcaacccgctcgagtacctgaagttcacc
ttcaccgacgtgatcatcaccagcgtgtcgccgttcggctccaacaccgacgagctgcgc
gtcaaggagcgcgtgcgcctgtcgttctcgaagatcaagcaggaatacgccgtgcagaac
gcgcagggcggcagcggcggcgcggtcaccgccggctatgacatcaagggcaacaaagag
tcctga

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