Rhodoferax koreensis: RD110_15305
Help
Entry
RD110_15305 CDS
T04721
Name
(GenBank) exonuclease
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rhy
Rhodoferax koreensis
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhy03400
]
RD110_15305
Enzymes [BR:
rhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RD110_15305
DNA repair and recombination proteins [BR:
rhy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RD110_15305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
APW38392
UniProt:
A0A1P8JXA5
LinkDB
All DBs
Position
complement(3313959..3316541)
Genome browser
AA seq
860 aa
AA seq
DB search
MPLSASHPVDRLWREPATGWLARIAAEIDARGAHAARSVVLLPYAQLMPLAQRLWAEVHP
DGFAPRFETTQNWARGLGGTALGAIDLRGDAALDGLQAPALLDAAGLGAQRDALAGRLVE
AAHQLAPLAAAVAPADRAAWAVSARAALATGMDSPVLAWEAAVARIALEWAAISAYTTDV
LWSPGLAASLECVVVLQGFQADGLVTALAASWGDKAAVLPWQPELETADDLPPAIHAAIH
AALDAEDEAQRAAACVLRHVEAGRIPVGLAAIDRLLTRRVRAMLAAHHVAIRDETGWKLS
TTRAAGHLMSALRASRWDASSDAVLNWLKNAPAFAPSVVRVLEKKLRQAAATDWSGWSAS
AVFDREALAERVAECVNLANTLRAGLQRARPLAAWLAALRDVLQQSGQWTLLEADAAGEK
LLAALRLVPGAEHELAGLPQAARRLLAFEFGAWVDTALESASFVPDYPLHEQVVITPLSQ
LLARPFAALVLPGCDEIRLAASPEPPGAWTAAQRAALGLPSRDAIAASQLAAWQDALRMP
MVDVLWRQSDASGETLLPSPLVQAIQPGANAVAAVDPRMARTVVATPTLRPLPVGQALPV
THLSASAYEDLRRCPYRFFALRQLGLKEPEELEGEVDKRDFGNWLHAVLKTFHEGLKQAP
EPEHAARLALIDAAAAATTRDMRLSEEEFLPFAAAWPRVRDGYLAWLLQHEAAGGRFEEA
ESQRELPLGALTLIGTIDRVDQLPAGEDGEAAVMVIDYKTENQTRTQSRIKQPLEDTQLA
FYAALLPHDTLRAAYLNVGEKDGSKSFEQTAVVAARDALVHGIITDMERIAEGAVLAALG
EGAACEFCAARGLCRKDFWS
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgcccctctcagcctcccatcccgtcgaccggctctggcgcgaacccgccaccggctgg
ctggcgcgcatcgccgcagagatcgacgcgcgcggcgcgcatgccgcccgcagcgtggtc
ctgctgccgtatgcgcagctcatgccgctggcgcaaaggctgtgggccgaagtccatccc
gacggtttcgctccgcgcttcgagacgacgcagaactgggcgcgcggcctgggcggcacg
gcgctcggcgccatcgacctgcgcggcgacgccgcgctcgacggcctgcaagccccggcg
ctgctcgatgccgcgggcctgggcgcgcagcgcgacgcgctcgccggccgcctggtcgaa
gccgcgcaccagctcgcgccgctggccgcggccgtcgcgcccgcggaccgcgcggcctgg
gcggtctcggcgcgtgcggcactggccaccggcatggattcgccggtgctggcctgggag
gccgcggtggcccgcatcgccctcgaatgggccgccatctccgcctacaccaccgacgtg
ttgtggtcgcctggcctggccgcttcactcgaatgcgtggtcgtgctgcagggctttcaa
gccgacggactggtcacggcactggcggcatcgtggggcgacaaggcggccgtgctgcct
tggcagcccgaactcgaaacagccgatgacttgccgcccgcgatccatgccgccatccac
gcggccctggacgccgaggacgaagcccagcgcgccgcggcctgcgtgctgcgccatgtc
gaggccggccgcatccccgtgggcctggccgccattgaccggctgctcacgcgccgtgtg
cgcgccatgctggccgcgcaccacgtggccatccgcgacgagaccggctggaagctttcc
accacgcgcgcggccggccatttgatgtcggccctgcgcgcgagccgttgggacgccagc
agcgacgccgtgctcaattggctgaagaacgcgcctgccttcgccccgagcgtggtgcgc
gtgctggagaagaaattgcgccaggccgcggccaccgactggagcggctggagcgcctcg
gccgtcttcgatcgcgaggctctggccgagcgcgttgcggaatgtgtgaatctggccaac
acgctgcgcgccggcctgcagcgcgcacggccgctcgccgcctggctggcggcattgcgc
gacgtgctgcaacagagcggccagtggacgctgctcgaagccgatgccgcgggcgaaaaa
ctgctggcggcgctgcgcctggtgcctggcgccgaacacgaactcgccggcctgccacag
gccgcacggcggctgttggctttcgagttcggcgcctgggtcgacaccgcgctcgagtcg
gcgagtttcgtgcccgactatccgctgcacgaacaggtagtgatcacgccgctgagccag
ttgcttgcgcggccgttcgcggccctggtcctgcccggctgcgacgagatccgcctggcc
gcttcacccgaaccgcccggcgcgtggaccgccgcgcaacgcgccgcgctcggcctgcct
tcgcgcgacgccatcgccgcgagccagctcgccgcctggcaggacgcgctgcgcatgccc
atggtcgatgtgctgtggcggcagagcgatgcgagtggcgagaccctgttgccgagcccg
ctggtgcaggcgatccagcccggtgcgaatgcggtcgcggccgtcgatccacggatggcc
cgaaccgtcgtggccacgccgacgctgcgcccgctgcccgtgggccaggccttgccggtc
acgcacctgtcggcgagtgcctatgaagacctgcggcgttgcccctaccggttcttcgcg
ctgcgccagctcgggctgaaggagcccgaggagctggaaggcgaggtcgacaagcgcgac
ttcggcaactggctgcacgccgtgctcaagaccttccatgaaggcctgaagcaggcgccc
gagcccgaacatgcggcgcgcctggccttgatcgacgcggcggccgcggccaccacgcgc
gacatgcgtctgtccgaagaagagttcctgccgttcgccgccgcctggccgcgcgtgcgc
gacggctacctggcctggctgctgcagcacgaggcggccggcggccgtttcgaggaggcc
gaaagccaacgcgagttgccactcggtgcgctcacactgatcggcaccatcgaccgcgtg
gaccagttgccggccggagaagacggcgaagccgcggtgatggtcatcgactacaagacc
gagaaccagacccgcacgcaaagccgcatcaagcagccgctcgaagacacgcagctcgcg
ttctacgccgccttgctgccacacgacacgctgcgcgccgcctacctcaacgtgggcgaa
aaggacggcagcaagagcttcgagcagaccgcggtggtggccgcgcgcgacgcgctggtg
cacggcatcatcaccgacatggaacgcatcgccgaaggcgcggtgctggccgcgctgggc
gagggtgcggcctgcgagttctgcgcggcgcgaggcctttgccgtaaagacttctggtct
tga
DBGET
integrated database retrieval system
