Rhodoferax koreensis: RD110_15490
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Entry
RD110_15490 CDS
T04721
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rhy
Rhodoferax koreensis
Pathway
rhy00730
Thiamine metabolism
rhy01100
Metabolic pathways
rhy01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RD110_15490
Enzymes [BR:
rhy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
RD110_15490
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
APW38425
UniProt:
A0A1P8JXG0
LinkDB
All DBs
Position
complement(3354980..3356890)
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AA seq
636 aa
AA seq
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MNAPDRLDPAKFAELLALTREPFPASRKAYLRGRLHPDLRVPVRDIALSNGEAVSVYDTS
GPYTDAGASIDVRRGLEALRAPWIAARGDTEAYAGRAPQSLDDGTRDEAHARLAALRLEA
AGLQRTPRRARPGANVTQMHYARRGIVTPEMEYVAIRENGRREWMADYLGDTTREQRLAG
NPMGAQIPRIITPEFVRDEVARGRAIIPANINHPEIEPMAIGRNFLVKINANIGNSAVTS
SIDEEVEKLVWAIRWGADNVMDLSTGRNIHTTRDWIVRNSPVPIGTVPIYQALEKVGGVA
EDLTWEIFRDTLIEQAEQGVDYFTIHAGVRLAYIHLTAGRRTGIVSRGGSIMAKWCITHH
KESFLYTHFEDICDIMKQYDVSFSLGDGLRPGSGADANDEAQFAELRTLGELTQVAWKHD
VQTMIEGPGHVPMHMIQANMVEQLKHCHEAPFYTLGPLTIDIAPGYDHIASAIGAAMIGW
FGTAMLCHVTPKEHLGLPDRDDVKAGIIAYKIAAHAADVAKGHPSARARDDALSKARFEF
RWSDQFNLSLDPDTARDFHDETLPKDSSKEAHFCSMCGPKFCSMKITQDVRDYAARRGVS
EEVALQQGLREKSAEFRDAGGEFYIPIRPVTGATSS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcccgaccgcctcgaccccgccaagttcgccgaactcctggcactcacccgc
gaaccttttccagcctcgcgcaaggcctacctgcggggccggctccaccccgatctgcgc
gtgccggtgcgcgacatcgcgctctccaatggcgaggcggtttccgtctacgacacctcc
ggcccctacaccgacgccggtgcgagcatcgacgtgcggcgcgggctcgaagccttgcgc
gcgccatggatcgcggcgcgtggcgacaccgaggcctacgctggtcgcgcgccgcaatcg
ctcgacgatggcacgcgcgacgaagcccacgcgcgcctggccgcgctgcgcctggaagcc
gccggcctgcagcgcacgccacgccgcgccaggcctggcgccaacgtgacccagatgcac
tacgcgcgccgcggcatcgtcacgcccgagatggaatacgtggcgatccgcgagaacggc
cgccgcgaatggatggccgattacctcggcgacaccacgcgcgagcaacgcctcgcaggc
aaccccatgggtgcgcagatcccgcgcatcatcacgcccgagttcgtacgcgacgaggtg
gcgcggggcagggcgatcatcccggccaacatcaaccatcccgagatcgagccgatggcc
atcggccgcaacttcctggtgaagatcaacgccaacatcggcaactccgccgtcacgtcc
agcatcgacgaagaggtggagaaactggtgtgggccatccgctggggcgcggacaacgtg
atggacctgtccaccggccgcaacatccacaccacgcgcgactggatcgtgcgcaacagc
ccggtgccgatcggcacggtgccgatctaccaggcgttggaaaaggtaggcggtgtggct
gaggacctgacctgggagatcttccgcgacacgctcatcgagcaggcggagcagggcgtg
gactacttcaccatccatgcgggcgtgcggctggcctacatccacctcacggccggccgg
cgcaccggcatcgtctcgcgcggcggctcgatcatggccaagtggtgcatcacccaccac
aaggaaagtttcctctacacgcacttcgaggacatctgcgacatcatgaagcagtacgac
gtgagcttctcgctcggcgacggcctcaggcccggctcgggtgcggacgccaacgacgag
gcccagttcgccgaactgcgcacgctgggcgaactcacgcaggtggcctggaaacacgat
gtgcagaccatgatcgaaggcccgggccacgtgccgatgcacatgatccaggccaacatg
gtcgagcagctcaagcactgccacgaggcgccgttctacacgctgggcccgctgaccatc
gacatcgcgcccggctacgaccacatcgccagcgccatcggcgcggccatgatcggctgg
ttcggcacagccatgctgtgccacgtcacgcccaaggaacacctgggcctgccggaccgc
gacgacgtcaaggcgggcatcatcgcgtacaagatcgccgcgcatgcggccgacgttgcc
aaggggcatccgtcggcgcgcgcgcgggacgacgccctgtccaaggcgcgcttcgagttc
cgctggagcgaccagttcaacctctcgctcgacccggacaccgcgcgcgacttccacgac
gagaccctgcccaaggactcgagcaaggaagcgcatttctgctcgatgtgcggcccgaag
ttctgctcgatgaagatcacccaggacgtgcgcgactatgcggcgcggcgcggcgtgagc
gaggaggtggccttgcagcaggggctgcgggagaagtcggcggagttccgcgatgcgggc
ggcgagttctacatcccgatccgccccgtcaccggtgccacatcgtcttag
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