Rhodoferax koreensis: RD110_18360
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Entry
RD110_18360 CDS
T04721
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhy
Rhodoferax koreensis
Pathway
rhy03030
DNA replication
rhy03430
Mismatch repair
rhy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RD110_18360
03430 Mismatch repair
RD110_18360
03440 Homologous recombination
RD110_18360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhy03032
]
RD110_18360
03400 DNA repair and recombination proteins [BR:
rhy03400
]
RD110_18360
Enzymes [BR:
rhy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RD110_18360
DNA replication proteins [BR:
rhy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RD110_18360
DNA repair and recombination proteins [BR:
rhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RD110_18360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Paxt-1_C
Motif
Other DBs
NCBI-ProteinID:
APW38926
UniProt:
A0A1P8JYU1
LinkDB
All DBs
Position
complement(3964941..3965654)
Genome browser
AA seq
237 aa
AA seq
DB search
MRQIVLDTETTGLSAAGGDRIIEIGCVELLNRKLTGNNKHFYLNPERDSHEDALKVHGIS
NEFLRDKPKFAAVADELLEYLSGAEVIIHNAQFDVSFLNKELELIGREPLSAFVGSVTDS
LAMAKELFPGKRNSLDALCDRLEVDNSGRTLHGALLDAELLADVYINLTRGQDALLIDAG
SEDTEAGTTIRVDLSGFELPILLANEQEDAAHQDLLKQLDKSSGGKTIWRTLEIFVA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagatcgttctcgacaccgaaaccaccggcctgtccgctgcgggcggcgaccgc
atcatcgaaatcggctgtgtggagttgctcaaccgcaagctcaccggcaacaacaagcac
ttttacctgaaccccgagcgcgacagccatgaagacgcgctgaaggtgcacggcatcagc
aacgaattcctgcgcgacaagccgaagttcgccgccgtggccgacgagttgctggaatac
ctgagcggcgccgaagtcatcatccacaacgcgcagttcgacgtgagtttcttgaacaag
gaactcgagttgatcgggcgcgagcctttgagcgccttcgtcggcagcgtgaccgactcg
ctggcgatggccaaggagctgttccccggcaagcgcaattcgctcgatgcgctgtgcgat
cgactggaggtcgacaactcgggccgcacgctgcacggcgccttgctcgatgccgagttg
ctggccgacgtctacatcaacctcacgcgtggccaggacgcgctcttgatcgacgcgggc
tccgaagacaccgaggccgggacgaccatccgcgtcgacctcagcggcttcgagctgccg
atcctgctggccaatgagcaggaagatgcggcccaccaggatctgctcaagcagctcgat
aaatcgagcggcggcaagacgatctggcggacactcgaaatttttgtggcataa
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