Rhodoferax koreensis: RD110_18945
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Entry
RD110_18945 CDS
T04721
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rhy
Rhodoferax koreensis
Pathway
rhy00260
Glycine, serine and threonine metabolism
rhy00460
Cyanoamino acid metabolism
rhy00630
Glyoxylate and dicarboxylate metabolism
rhy00670
One carbon pool by folate
rhy00680
Methane metabolism
rhy01100
Metabolic pathways
rhy01110
Biosynthesis of secondary metabolites
rhy01120
Microbial metabolism in diverse environments
rhy01200
Carbon metabolism
rhy01230
Biosynthesis of amino acids
rhy01240
Biosynthesis of cofactors
rhy04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RD110_18945 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RD110_18945 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RD110_18945 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RD110_18945 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RD110_18945 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RD110_18945 (glyA)
Enzymes [BR:
rhy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RD110_18945 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
APW39029
UniProt:
A0A1P8JZ42
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All DBs
Position
4078774..4080018
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AA seq
414 aa
AA seq
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MYDRNILIEQADPEIFQAIQKENARQEHHIELIASENYASPAVMAAQGSQLTNKYAEGYP
GRRYYGGCEYVDVAEQLAIDRIKQIFGAEAANVQPHCGASANEAVFLAFLKPGDTIMGMS
LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDYDAMERKAHETKPKLIIAGASAYSLR
IDFERFAKVAKAVGAIFMVDIAHYAGLVAAGVYPNPVPHADVVTSTTHKSLRGPRGGIIL
MKAEHEKAINSAIFPGLQGGPLMHVIAAKAVAFKEAMAPEFKAYQQQVVKNAKIVAETLT
ARGLRIVSGGTESHVMLVDLRAKGITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVR
IGTPAMTTRGFKDEEARITANLIADVLDNPRDEANIAAVRAKVNALTARFPVYR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccgcaacattctgatcgagcaagccgacccggaaatcttccaggccatccag
aaggaaaacgcgcgccaggaacaccacatcgagctgatcgcgagcgaaaactacgcctcg
ccggccgtgatggctgcacagggttcgcagctcaccaacaaatacgctgaaggctacccc
ggccgccgctactacggcggctgcgaatacgtggacgtggccgaacagctggccatcgac
cgcatcaagcagatttttggcgccgaagccgccaacgtgcagccgcattgcggcgcgtcg
gccaatgaagccgtgttcctggccttcctgaagcccggcgacaccatcatgggcatgagc
ctggccgaaggcggccacctgacccacggcatggcgctgaacatgagcggcaagtggttc
aacgtggtgagctacggcctgaacgacaaggaagagatcgactacgacgcgatggagcgc
aaggcgcacgaaaccaagcccaagctgatcatcgccggtgcctcggcctacagcctgcgc
atcgacttcgaacgcttcgccaaggtggccaaggccgtcggcgcgatcttcatggtcgac
atcgcccactacgccggcctggtggccgcgggcgtgtaccccaacccagtgccgcatgcc
gacgtcgtcacctccaccacgcacaagagcctgcgcggcccgcgtggcggcatcatcctg
atgaaggcggagcatgaaaaggccatcaacagcgcgattttccccggcctgcaaggcggc
ccgctgatgcatgtgatcgccgccaaagcggtggcgttcaaggaagccatggcgcccgag
ttcaaggcttaccagcaacaggtggtgaagaacgccaagatcgtcgccgaaaccctgacg
gcgcgcggcctgcgcatcgtcagcggcggcaccgagtcacacgtgatgctggtcgacctg
cgcgccaagggcatcaccggcaaggaagccgaagccgtactgggcagcgcgcacatgacg
atcaacaagaacgccatcccgaacgacccggaaaagccgatggtcaccagcggcgtgcgc
atcggcacgccagccatgaccacccgcggtttcaaggatgaggaagcccgcatcacggcc
aacctgatcgccgacgtgctcgacaacccgcgcgacgaagccaacatcgccgccgtgcgc
gccaaggtcaacgcgctgaccgcgcgtttcccggtctatcgctga
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