Rhodoferax koreensis: RD110_19345
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Entry
RD110_19345 CDS
T04721
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rhy
Rhodoferax koreensis
Pathway
rhy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD110_19345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhy02000
]
RD110_19345
Transporters [BR:
rhy02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RD110_19345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
APW39100
UniProt:
A0A1P8JZC4
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All DBs
Position
complement(4160325..4161392)
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AA seq
355 aa
AA seq
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MSHSHKSRFLRRALFGVAAAAALAAGGAAFAQTKTLYIGMNGGTMEKAYTQYVFPAFEKL
NNVKVVVVPGTSSDILAKAQANKDKPQMHVMFLDDGIMVRAIGMGLCQKQRPSPALAEIY
PAARFKDDMASGVSLGMTGLAYNTKMFKEKGWAAPTSWMDLADPKFKGKVVFQSMSSSSF
GLHGFLMFNRIQGGNDKNVEPGFKAWPTTIGPNVLEYIPSSAKISEMVQTGEAALFPLTP
TAVAALKTKGIPVDYAQPKEGSVVLMVGQCVIANNSEPELSQKLAEFLLSPLAQANVLQF
GSQIPTNPKAPAVGEGAQQVAEINKWMKNAVTIDWDSVNANRPAWNARWNKTIER
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtcccattcccacaagtcacgcttcttgcgccgcgcgctgttcggcgtggccgccgcg
gccgccctggccgccgggggcgcggccttcgcgcagaccaagacgctgtacatcggcatg
aacggcggcacgatggagaaggcgtacacgcagtatgtgttcccggccttcgagaagctc
aacaacgtgaaggtggtggtggtgcccggcacgtcatccgacatcctggccaaggcgcag
gccaacaaggacaagccgcagatgcacgtgatgttcctcgacgacggcatcatggtgcgg
gccatcggcatgggcctgtgccagaagcagcggcccagcccggcgctggccgagatctac
ccggccgcgcgcttcaaggacgacatggccagcggcgtgagcctgggcatgaccggcctg
gcctacaacaccaagatgttcaaggaaaagggctgggcggcaccgacctcgtggatggac
ctggccgacccgaagttcaagggcaaggtggtgttccagtcgatgtcgtcgtcctcgttc
ggcctgcacggcttcctgatgttcaaccgcatccagggcggcaacgacaagaacgtggaa
cccggcttcaaggcttggccgaccaccatcggcccgaacgtgctggagtacatcccgagc
tcggccaagatctccgagatggtgcagaccggcgaggccgcgctgttcccgctcacgccc
accgcagtggccgcactcaagaccaagggcatcccggtcgattacgcgcaacccaaggaa
ggctcggtggtgctgatggtgggtcagtgcgtgatcgccaacaacagcgagccggagctg
tcgcagaagctcgccgagttcctgctcagcccgctggcccaggccaatgtgctgcagttc
ggcagccagatcccgaccaacccgaaggcgccggccgtgggggagggcgcgcagcaggtc
gcggagatcaacaagtggatgaagaacgccgtcaccatcgactgggacagcgtcaacgcc
aaccgcccggcgtggaatgcacgctggaacaagacgatcgagcgctga
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