Rhodoferax koreensis: RD110_19490
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Entry
RD110_19490 CDS
T04721
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
rhy
Rhodoferax koreensis
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhy03009
]
RD110_19490
Enzymes [BR:
rhy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
RD110_19490
Ribosome biogenesis [BR:
rhy03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RD110_19490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
APW39125
UniProt:
A0A1P8JZH1
LinkDB
All DBs
Position
complement(4192818..4193561)
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AA seq
247 aa
AA seq
DB search
MQLQDILYSQGFGTRRVCAGLVQQGLVEVYASKDATAPVLITESAMDFEEEGLRFRVQGV
DWAYHRLAYVLLNKPAGTECSQKPSTYPSIYTLLPSPLRLRPQKSAVQGVQAVGRLDQDT
TGLLLLSDDGQFIHRMSSPKKHVPKVYEVTTKHAVDDKQVQRLLAGVVLDDDPKPVRAAA
CTVNGENQLSLTLTEGKYHQVKRMLAAVGNRVEGLHRSRIGELALPADLLPGQWRWLDAD
DLAKLRG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgcaagacattctttattcccagggtttcggcacgcgccgcgtctgtgccggc
ctggtgcagcagggcctggtcgaggtctatgcatcgaaagacgccacggcgccggtgctg
attacggagtccgctatggatttcgaagaggaaggcctgcgttttcgcgtacagggcgtg
gactgggcctaccatcggctggcctatgtgctgctcaacaagcctgcgggcaccgagtgt
tcgcaaaagccttcgacctatccgagcatctacacgctgctgccgtcgccgctgcgcctg
cgcccgcagaaaagcgcggtgcagggcgtgcaggcggtcggtcggctcgaccaggacacg
accggcctgctgctgctcagcgacgacggccagttcatccaccgcatgagctcgccgaag
aagcacgtgcccaaggtctacgaggtcacgaccaaacacgcggtcgacgacaaacaggtg
cagcggctgctggccggggtggtgctggacgacgatccgaagccggtgcgcgccgcggct
tgcacggtcaacggtgaaaaccagctcagcctgacgttgacggaaggcaagtaccaccag
gtcaagcgcatgctggcggcggtgggcaatcgcgtcgaaggcctgcaccggtcgcgcatc
ggcgaactggcgctgccggccgacctgttgccggggcagtggcgctggctcgatgccgac
gacctggccaaattgcgcggctga
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