Rhodoferax koreensis: RD110_19660
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Entry
RD110_19660 CDS
T04721
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
rhy
Rhodoferax koreensis
Pathway
rhy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD110_19660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA14
He_PIG
GO-like_E_set
PKD_4
PKD
F5_F8_type_C
Kelch_6
Jacalin
F5_F8_type_C_2
Big_9
Beta-prop_WDR90_POC16_2nd
Glyoxal_oxid_N
YNCE
Beta-prop_EML_2
Cytochrom_C
CCP_MauG
GLEYA
Kelch_1
Vgb_lyase
Cytochrome_CBB3
Cytochrom_D1
DUF5074
Kelch_4
DUF5000
Mala_s_1-like
Motif
Other DBs
NCBI-ProteinID:
APW39155
UniProt:
A0A1P8JZJ6
LinkDB
All DBs
Position
complement(4232594..4238716)
Genome browser
AA seq
2040 aa
AA seq
DB search
MASIDQAQWSPLTATSLVPVSAANLPNGEVLLWAADDPFNYGTVGQAYSTTFDPVSGKFT
DRLVNNTGHNLFCPGTTNLADGRLLVNGGSQAGATSLYDPSTNTWTAGGKMQITRGYNAN
TLLQDGSVFTLGGSFSGGQGNKHGEVWTASAGWKRLTGVPVDNMVGPDSAGVYRGDNHMW
LLPTGNGMVLHAGPSANMNWIDTRGNGSVTPAGRRGDDAYSMSGTAVMYDVGKILKAGGS
PSYQNVNATAGSYIIDVNDGLQVRKIAPMAYARAYHNSVVLPNGQVIVIGGQSRPVMFTD
GNAVLVPELFDPATEKFTALPPIAVPRNYHSVALLLPDARVLSAGGGLCGEGCAANHANL
QILSPHYLFKSDGTPATRPVITNAPARTGYGQTMQVTTDSPVTAFALVRASSTTHTVNND
QRRIPLTFIGTGVNSYTVNVPTNPGWALPGYYMLFALNADGVPAVARTVLLSNSNTPVIA
TVGDQSTAVGATVNLAVAATSPTGAALTHAATGLPPGLALNPATGTITGTPTMPGRYAVN
LTVGDGVQKVSHEFVWTVADASRPRYVKFEALSAINGQALASMAEFNILDTKGAVLPRTG
WKVSVDSAETAAESGIDGNAIDGNAATYWLTAATPTPAPMPHWLVVDMGLAQKISAVRYL
PRAGGGEGTVAEFRVYVSADGVNWNAPVAAGNLADLGAATAEKTIPVALVGGINQAPMIA
TPAPPSVTQGQSVSLKLSATDPDGDVLTYSASGLPSGLTLHASTGVIDGAPDVGGNYAVT
VTATDPGGMSASASFSWSVSSLPPVIAPVATAPAVSHGAVQYTASANGAGPFLYQWDFGD
GSPATGFNSSAGVSHVYTTPGIYTVTLTVRNGAASSSRTFLQAVGAQAVAGAAAASSGLA
LERGVGNTRLWAVNPDNDTVSVFDTATSRKLADIAVGAQPQTVAQAPDGRLWVVNKDSAT
VSIISPGSLSVVQTISLARGSQPHGLVFAKDGNALVTLEALGQLVKLSSGGARLASLDVG
PNPRHISRTPDGSRLLVSRFITRPQPGEGTAAVQTTVNGVKQGGEVLVVDASDLRLRRTV
VLQHSDKADSTTQGRGVPNYLGAAAVSPDGASAWVPSKQDNIQRGALRDRLDLDFQNTVR
AVSSRIALGSLSEDYAARVDHDNAGVASAAVYHPSGAYLFVTLESSRQLAVLDAAAGREV
LRVDTGRAPQSVVVSDDGRKLFVSNFMDRTVGVYDLTRLINFGEADVPLQAVLDSGGPEK
LAPEVLKGKQFFYDARDPRLARDGYLSCASCHNDAGHDGRTWDFTSLGEGLRRTIALKGR
AGMGNGFLHWSANFDEVQDFEGQIRKLAGGTGLMSDDKFNAGTRAQPLGDPKAGQSADLD
ALAAYLRSLAKFAPSPYRDAGGALTESAQAGSAIFADRNCAACHGGSAFTASSDGSGLRN
IGTLKASSGKRLGAVLTGIDIPTLRDVWNDSSYLHDGSALTLGDAVQAHGTAIPGALLTA
TELTRLSDYLRQIGSDETTAPAIYPVVQGPGTVSMAVGSGLSLPIKASTSAGVLSYSATG
LPAGMRIDPVSGEISGTATTPGRYVVTVLVGNGSQSVNVAFLIDISPELAGTGLLAQYFD
NPNLLGTPVMQSVNVPFVSWGAAAPVLGVPADNFSIRWSGMVEAPVTGNVQFRAYADDGM
RLWIDNKLLVDAWNTPNSDSATISVPMVAGRRYAVTLEYNERRGNAAMRLEWKPPGSSLW
TAVPAARLYATADMGTGLSAQYFGNASLSGAPVMQRVEAPSFDWGGAAPAKGLPADGFSV
RWTGTMEASATGPMQLRTFSDDGVRVWIDGQMIIDDWMPHGGKYDTASIAMVAGQRHAVT
IEYFERSGSAAMRFEWKPPGVSEWRSVPAAFLYPAGASERSPIFGYLQGGTEFSDGPVSG
QTLVGIELRAGPGVNAVQGFGAPVYWPLHGVASGVANRFALFNGEYLVRLYGQIGQSSGS
IAQLSFVTNTGRVLGPVGLPDGQEAVSGFDYTVPAGQRVVGLAGRSSSSVNAIGVVLGPR
NT seq
6123 nt
NT seq
+upstream
nt +downstream
nt
atggccagcatcgatcaggcgcagtggtcaccgctgacggccaccagtctggtgccggtg
tcggccgcgaaccttcccaacggcgaagtcctgctgtgggcggctgacgaccccttcaac
tacggcacggtcggccaggcttattcgaccaccttcgatcccgtctccggcaagttcacc
gaccggctcgtgaataacaccggccacaacctgttctgtcctggtaccaccaacctcgcg
gatggacgcctgctcgtcaacggcggctcgcaggccggtgcgacctcgctctacgacccc
tcgaccaacacctggacagccggtgggaagatgcagatcacccgcggctacaacgccaac
accctgctgcaggatggctcggtgttcaccctcggcggctcgttcagtggcggtcaaggc
aacaaacatggcgaggtgtggaccgcttccgcaggatggaagcgcctgaccggcgtgccg
gtcgacaacatggtcggcccggattcggcaggcgtctaccgcggcgacaatcacatgtgg
ctgctgcccaccggcaatgggatggtgctgcacgccgggccgagcgccaacatgaactgg
atcgacacccgcggcaacggcagcgtgacgccagccggcaggcggggcgacgatgcctac
agcatgagcggcaccgcggtgatgtacgacgtgggcaagatcctcaaggcggggggctcg
ccgtcctaccagaacgtcaatgccacggccggcagttacatcatcgatgtcaacgacggc
ctgcaggtgcgcaagatcgcccctatggcttatgcccgggcttaccacaacagcgtggtg
ctgcccaatggccaggtgatcgtgatcggtggccagagccggccggtgatgttcaccgac
ggcaacgcggtgctggtgccggaactgttcgatcccgcgaccgaaaaattcaccgcgctg
ccgccgattgcggtgccgcgcaactaccacagcgtggcgctgctgctgcccgatgcacgc
gtgttgtccgccggcggcgggctgtgcggcgaaggctgcgcggccaaccatgccaacctg
cagatcctgagcccgcattacctgttcaagagcgacggcacgccggcgacgcggccggtg
atcacgaacgctcccgcgcgcaccggctacggccagaccatgcaggtcacgaccgacagc
ccggtgaccgcattcgcgctggtgcgcgcttcctccaccacgcacaccgtcaacaacgac
cagcggcgcatcccgctgaccttcatcggcaccggcgtgaacagctacaccgtcaacgtg
ccgacgaatcccggctgggcgctgcccggctattacatgttgttcgccttgaatgcggac
ggcgtgccggcggtggccaggacggtattgctgagcaacagcaatacgccggtgatcgcc
acggtgggcgaccagtccacggcggtcggcgccacggtgaacctggcggtggcggcgacc
agcccgaccggcgccgcattgacccatgcggcgaccgggctgccgccgggcctggcattg
aacccggccaccggcacgatcaccggcacgcccaccatgcccgggcgctacgcggtgaac
ctgacggtcggcgatggcgtgcagaaggtcagccacgaattcgtctggacggtggccgat
gccagccggccgcgttacgtcaagttcgaagccctcagcgcgatcaacgggcaggccctg
gcttcgatggccgaattcaacatcctcgacaccaagggtgcggtgttgccgcgcactggt
tggaaggtctcggtcgacagcgccgagaccgcggccgaatcgggcatcgacggcaatgcc
atcgacggcaatgccgccacctactggctgaccgccgccacgccgacgccggcgcccatg
ccgcactggctggtggtcgacatggggctggcgcagaagatcagcgccgtgcgttacctg
ccgcgagcgggcggcggcgagggcacggtagcggaattccgggtgtatgtcagcgccgac
ggcgtcaactggaacgctcccgtggcggccggtaacctggccgatctcggtgcggcaacg
gcggagaaaaccattcccgtggcgttggtcggcggcatcaaccaggcgccgatgatcgca
acgcccgcgccgccttccgtgacccaggggcagtcggtctccctcaagctgagcgccacc
gatcccgatggcgatgtgctgacctattccgccagcggactcccctcgggcctgacgctg
catgcctccacgggagtcatcgatggcgctcccgatgtcggcggcaactatgcggtcacc
gtcacggccaccgaccccgggggcatgagcgccagcgccagcttcagctggagcgtatcg
agccttccgcccgtcatcgcaccggtggccaccgcgcccgcggtgagccacggcgcggtc
caatacacagccagtgccaacggcgccggcccgttcctgtaccaatgggatttcggcgat
ggcagtccggccaccggtttcaacagcagtgccggcgtgtcccacgtctacacgacaccc
ggcatctacaccgtgacgctgacggtgcgcaacggtgcggcgtcgtccagccgcacgttc
ctgcaggcggtgggcgcccaggccgtggccggcgccgcagcagcgtcgtcgggcctggcg
ctcgagaggggcgtgggcaatacccggctgtgggccgtcaacccggacaacgacacggtg
tcggtgttcgacaccgccaccagccgcaagctggccgacattgccgtcggtgcccagccg
cagacggtggcccaggcgcccgatgggcgcctgtgggtcgtcaacaaggactcggcgaca
gtgagcatcatcagcccgggcagcctgtcggtggtgcagaccatcagcctggcccgcggg
tcgcaaccccatgggctggtgttcgccaaggatggcaacgccctcgtgacgctggaggcc
ttggggcagttggtcaaactctcttccggcggcgcgcggctggccagcctggatgtcggc
ccgaatccgcgccacatcagccgcacgcccgacggaagccgtttgctggtctcgcgtttc
atcacccggccccagcccggcgagggcacggccgccgtgcaaaccacggtgaacggtgtg
aagcagggcggcgaggtgctggtggtggacgcgtccgacctcaggctcaggcgcaccgtg
gtactgcagcacagcgacaaggccgacagcaccacccagggccggggcgtgcccaactac
ctcggggcggccgcggtgtcgcccgatggcgccagcgcgtgggtgccgtccaagcaggac
aacatccagcggggtgcgttgcgcgacaggctcgatctcgatttccagaataccgtgcgc
gccgtttcctcgcggatcgcactgggcagcttgagcgaagactatgcggcccgggtggac
cacgacaacgccggggtggccagcgcggcggtctaccatccctccggcgcctaccttttc
gtcacgttggagagcagtcggcaactggcggtgctcgacgcggccgcaggccgggaagtc
ctgcgggtggacaccgggcgtgcaccgcagagcgtggtcgtttcggatgacggccgcaaa
ctgttcgtgtccaacttcatggaccgcaccgttggcgtgtacgacctgacccggctgatc
aacttcggcgaggccgacgtgccgctgcaggccgtgctcgacagcggtggcccggaaaaa
ctcgcacccgaggtgctcaagggcaaacagttcttctacgacgcgcgtgacccgcgcctg
gcccgcgacggctacctgagttgcgccagttgccacaacgatgccggccatgatggccgc
acctgggacttcaccagcttgggcgaaggcctgcggcgcacgatcgccctgaagggccgg
gcgggcatgggcaacggctttttgcactggagcgccaatttcgacgaggtccaggacttc
gaaggccagatccgtaaactggccggcggcacaggcctgatgagcgacgacaagttcaac
gccggcacgcgtgcccagccactgggggacccgaaggccggccagagtgccgatctggac
gccctggcggcctacctacgttcgctcgccaagttcgcccccagtccgtaccgcgatgcc
ggaggagcgctcaccgaaagcgcgcaggccggcagtgcgattttcgccgaccgcaattgc
gccgcgtgccacggcggcagcgccttcacggccagcagcgatggcagcggattgaggaac
atcggcacgctcaaggcatccagcggcaagcgcctgggggcggtcttgaccgggatcgac
attcccaccctgcgcgacgtgtggaacgactcgtcctacctgcacgacggctcggcgctc
acgctgggcgacgcggtgcaggcccacggcaccgccattcccggcgcacttctcaccgcc
acggagctcaccaggctctcggactacctgcgccagatcggcagtgacgaaacgacggcc
ccggcgatctatccggtggtgcaggggccgggcaccgtcagcatggcggtgggcagcggg
ctgtcgctgccgatcaaggccagcacgagcgcaggcgtgctgagctacagtgccaccggc
ctgccggcaggcatgcggatcgatccggtgtccggcgagatcagtggcacggcgaccacg
ccgggccgctacgtggtcacggtgctggtgggcaacggtagccagtccgtgaacgtcgcc
ttcctgatcgacatctcacccgagttggccggcaccggactgctggcgcaatatttcgat
aaccccaacctgctcggcacacccgtcatgcagagcgtgaatgtgccattcgtcagttgg
ggcgcggcagcaccggtgcttggtgtgcccgccgacaatttctccatccggtggagtggc
atggtggaggcaccggtcacgggcaatgtgcagttccgcgcctacgccgacgacggcatg
cgcctgtggatcgacaacaagcttctcgtcgacgcctggaacaccccgaactcggattcg
gccaccatctcggtgccgatggtggccgggcgccgctatgcggtgaccctcgagtacaac
gagcgccgcggcaacgccgccatgcggctcgaatggaagccgcccggctcctccttatgg
accgcagtgcccgccgcacgcctgtatgcgacggccgacatgggcaccggactctccgcg
caatacttcggcaatgccagcctgagtggcgcaccggtgatgcagcgcgtggaagcgccg
tccttcgactggggtggcgcagcgccggccaagggtctgccggccgacgggttttccgtc
cgctggacggggacgatggaggcatccgccaccgggccgatgcaactgcggaccttcagc
gacgacggcgtgcgtgtctggatcgacggccagatgatcatcgacgactggatgccgcac
ggcggaaaatacgacaccgcttcgatcgcgatggtggcgggccagcgccatgcggtgacg
atcgagtatttcgagcgaagcggcagcgcagccatgcggttcgagtggaaaccgcctggc
gtgagcgagtggcgcagcgtgccggcggccttcctttaccccgcgggggcatcggaacgc
tcaccgattttcggctacctgcaaggcggcaccgagttttccgacggccccgtgagtggc
cagacgctggtgggcattgaactccgcgcgggccctggcgtgaatgccgtccaggggttc
ggcgcgccggtctattggcctttgcacggcgtggccagcggtgtggccaaccgttttgcg
ttgttcaatggcgaatacctggtgcggctctatggccagatcgggcagtccagcggcagc
attgcccaactcagcttcgtcacgaacacgggtcgcgtcttggggccggtcggtctgccg
gacggtcaggaagccgtgtccggcttcgactacacggtaccggccgggcagcgcgtcgtg
gggcttgcagggcgcagcagctcgagcgtgaacgccatcggggtggtgctcggtccgcgc
tga
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