Rhodoferax koreensis: RD110_19870
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Entry
RD110_19870 CDS
T04721
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rhy
Rhodoferax koreensis
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhy03009
]
RD110_19870 (rimO)
Enzymes [BR:
rhy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RD110_19870 (rimO)
Ribosome biogenesis [BR:
rhy03009
]
Prokaryotic type
ribosomal protein modification factors
RD110_19870 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
APW39193
UniProt:
A0A1P8JZK6
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All DBs
Position
complement(4283318..4284730)
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AA seq
470 aa
AA seq
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MKSDTYGAVATPEPAKIPKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFEGADLVIV
NTCGFIDDAVKESLDTIGEALAANGRVIVTGCLGAKSGGGGGNLVREMHPSVLAVTGPHA
TQEVMDAVHQNLPKPHDPFLDLVPNAFGSAGVKLTPKHYAYLKISEGCNHRCTFCIIPSM
RGDLVSRPIGDVLNDARALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLEL
VQTLGEIARPYGAWVRLHYVYPYPSVDEIIPLMATGSVLPYLDVPLQHSHPDVLRRMKRP
ASGEKNLERIQRWREACPELVIRSTFIAGFPGETEDEFTHLLDFMREAQIDRAGCFAYSP
VAGAAANEIPGMLPFELREERRARFMAVAEEVSAAKLQRRVGATMQVLVDSAPGLGRKGG
VGRSYADAPEIDGVVKLLPPEKISKTMKAGEFTKARIVGTQGHDLVALPI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagatacttacggcgcagtcgcgactccggaacccgccaaaatccccaaagtc
ggcttcgtcagcctcggttgtcccaaggccttgacggattccgaactgatcctcacgcaa
ctcagcgccgaaggctaccagacgtcgaagaccttcgaaggcgccgatctggtgatcgtc
aacacctgcggcttcatcgacgatgcggtcaaggagagcctggacaccattggtgaagcg
ctggccgccaacggccgggtcatcgtcaccggctgtctcggcgccaagtccggcggcggc
ggtggcaacctggtgcgcgagatgcatccgagcgtgctggccgtcaccggcccgcatgcc
acgcaggaagtcatggacgcggtgcatcagaacctgcccaagccgcacgatccgttcctc
gacctggtgcccaacgccttcggcagcgccggcgtcaagctcacgccgaagcactatgcc
tacctgaagatcagcgaaggctgcaaccaccgctgcacgttctgcatcatcccgtcgatg
cgtggcgacctggtgtcgcggccgatcggcgacgtgctgaacgacgcgcgcgcgctgttc
gaaggcggcgtgaaggagttgctggtgatcagccaggacacctcggcctacggtgtcgac
gtcaagtaccgcaccggtttctgggacggcaagccggtgaagacccgcatgctcgagctg
gtgcagacgctcggcgaaatcgccaggccgtacggcgcctgggtgcggctgcactacgtc
tatccgtatccgagcgtggacgagatcatcccgctgatggctaccggcagcgtgttgcct
tacctggacgtgccgctgcagcacagccacccggacgtgctccggcgcatgaagcgcccg
gccagcggcgagaagaaccttgagcgcatccagcgctggcgcgaggcctgccccgaactg
gtgatccgcagcaccttcatcgccggtttccccggcgagacggaggacgaattcacccac
ctgctcgacttcatgcgcgaggcgcagatcgaccgtgccggctgcttcgcctacagcccg
gtggcgggcgccgcggccaacgagattcccggcatgctgccattcgaactgcgcgaagaa
cgccgcgcgcgtttcatggccgtggccgaggaagtctcggccgccaagctgcaaaggcgc
gtgggcgccaccatgcaggtgctggtggattcggcaccgggcctgggccgcaagggtggg
gtggggcgcagttacgcggatgcgcccgagatcgacggcgtagtcaagctgttgccgccg
gagaagatcagcaagacgatgaaggcgggggaattcacgaaggcacgcatcgtcggcacg
caggggcatgatctggtggcgctgccgatctga
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