Rhodoferax koreensis: RD110_19940
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Entry
RD110_19940 CDS
T04721
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
rhy
Rhodoferax koreensis
Pathway
rhy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RD110_19940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhy03400
]
RD110_19940
Enzymes [BR:
rhy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RD110_19940
DNA repair and recombination proteins [BR:
rhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RD110_19940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Nsp1_C
KxDL
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-ProteinID:
APW39205
UniProt:
A0A1P8JZN7
LinkDB
All DBs
Position
complement(4299483..4299746)
Genome browser
AA seq
87 aa
AA seq
DB search
MPKAPASPVPTAAVPALSPVPASFEAAQEELEQLVSRLESGQMPLEQLLTGYQRGAELLK
FCRGKLEAVEDQIKVLDQGALKPWGQE
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggcccctgcctctcccgtcccaacggccgccgtaccggcgctttcgcccgta
cctgccagtttcgaggcggcgcaggaagagctcgaacaactggtgagccggctcgaatcg
ggccagatgccgctcgagcagttgctcacgggctaccagcgcggcgccgaactgttgaag
ttctgccgcggcaaactcgaagccgtggaagaccagatcaaggtgctcgaccagggcgcc
ctcaagccttgggggcaggaatga
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