Rhodoferax koreensis: RD110_20585
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Entry
RD110_20585 CDS
T04721
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rhy
Rhodoferax koreensis
Pathway
rhy00280
Valine, leucine and isoleucine degradation
rhy00650
Butanoate metabolism
rhy00907
Pinene, camphor and geraniol degradation
rhy01100
Metabolic pathways
rhy01120
Microbial metabolism in diverse environments
rhy04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RD110_20585
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RD110_20585
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RD110_20585
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RD110_20585
Enzymes [BR:
rhy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
RD110_20585
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
APW39316
UniProt:
A0A1P8JZX9
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Position
4433211..4434167
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AA seq
318 aa
AA seq
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MSKDASPRSDKWVDIIEVGTRDGLQIEKKLIPAAEKIAILDAMIASGIRLIEVTSFVSPK
AVPQLADAAEVLAGIARRDDTYLMALVPNVRGADRAAETSLDGGVLLCSASETHNRKNLN
RSIGESIDGFAAIAERLREAGIDRLGAVATAFGCPFEGEIDQANMFRIVRAYAELGVKHL
TLGDTTGMATPANVRATVRALKAEFPGLDLCLHLHNTRGVGLANVIVGLEEGVRRFDASV
GGLGGCPFAAGATGNICTEDLVYLLQESGYETGIDLCKSIDVALRMERALEKPLVGQVMR
AGPRLTLHAADAVPTAAG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagacgcgtcccccaggtccgacaaatgggtcgacatcatcgaagtcggcacg
cgcgacggcctgcagatcgaaaagaagctgatccctgccgccgagaagatcgccatcctc
gacgccatgatcgccagcggcatccgcctcatcgaggtgacctccttcgtgtcgccgaaa
gccgtgccgcaactcgccgatgcggccgaggtgctggccggcatcgcccggcgcgacgac
acctacctgatggcgctggtgcccaacgtgcgcggtgctgaccgcgcggccgaaacttcg
ctcgacggcggcgttttgctgtgctcggcctcggaaacccacaaccgcaagaacctgaac
cgcagcatcggcgagtcgatcgacggctttgcggccattgccgaacgtttgcgggaggcc
ggcatcgaccggctcggcgcggtcgccacggctttcggctgccctttcgaaggcgagatc
gatcaggccaacatgttccgcatcgtgcgcgcctatgcggagctcggcgtgaaacacctg
acgctgggcgacaccactggcatggccacgccggccaacgtgcgcgccacggtacgcgcg
ctgaaggccgaatttcccgggctcgacctctgcctgcatctgcacaacacgcgtggtgtg
ggcctggccaacgtcattgtcggactggaggaaggcgtgcgtcgcttcgatgcgtcggtg
ggtggcctgggcggctgcccgttcgcggccggcgccacgggcaacatctgcaccgaggac
ctggtctacctgctgcaggagagcggttatgagaccggcatcgacctgtgcaagtcgatc
gacgtcgcattgcgcatggagcgtgcgctcgagaagccgctggtcggccaggtgatgcgg
gcgggcccgcgactgacgctgcacgccgccgatgccgtgcccaccgctgcgggctag
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