Rhodoferax koreensis: RD110_20705
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Entry
RD110_20705 CDS
T04721
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rhy
Rhodoferax koreensis
Pathway
rhy00550
Peptidoglycan biosynthesis
rhy01100
Metabolic pathways
rhy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RD110_20705
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RD110_20705
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rhy01003
]
RD110_20705
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhy01011
]
RD110_20705
Enzymes [BR:
rhy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
RD110_20705
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RD110_20705
Glycosyltransferases [BR:
rhy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RD110_20705
Peptidoglycan biosynthesis and degradation proteins [BR:
rhy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
RD110_20705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
APW39338
UniProt:
A0A1P8K001
LinkDB
All DBs
Position
4458992..4461397
Genome browser
AA seq
801 aa
AA seq
DB search
MPSKPTSKPDTPSGKSAEARRTGWAAWLLRIVAWGAGLAIAGAVSVAIVIAIALSVAYPN
LPDISDLSDYRPKLPLRVFSAEGTLLGEFGEERRSLTPIKDIPQVMKDAVLAIEDARFYQ
HGGVDYKGVLRAAIANLGRVKSQGASTITMQVARNVYLSSEKTFTRKIYEILLTFKLEHL
LSKDQILEIYMNQIYLGNRAYGFAAASETYFGKPLKDISIAEAAMLAGLPKAPSAYNPIS
NPNRARTRQQYIIDRMAENGFITEDQAAAARKEELSVRSGANANRIHAEYVTETVRQLMY
AQYGDETYTRGLNVYTTLRSADQDVAYKALRRGLMDFERRQIYRGPEKFVTLPKDPAELD
DAIDEALLEHPDNGDVMSAMVLDANPKKITAVRGNGDAVEITGEGLKPAQSGLADKAPPN
IKLRRGAIIRVAKTPKDTWEITQLPEVEGAFVALDPRDGSIKALVGGFDFQKNKFNHVTQ
AWRQPGSSFKPFIYSAALEKGFTPATVVNDAPLFFDAGTTGGQPWEPKNYDGKFEGPMTL
RTALAKSKNMISIRILQAIGAQNGQEWATHFGFDADKHPAYLTMALGAGSVTPMQMASAY
SVFANGGYRVNPWIIAKVTDQRGKVLAETKPPVLDESVRAIPARNAFVMDSLLNEVATRG
TAASATRILKRPDLYGKTGTTNDSIDAWFAGFQPTLAAVTWIGYDTPRNLGSRETGGGLS
LPVWINFMETALKGVPVAPLVPPEGVVNVGGEWFYNEYARSTGVTSLGLDDKGVGGAGGT
EPPHPAPAAEERNRILDLFKN
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaaaacccacctccaaacccgacacgccatccggcaagtctgccgaagcgcgc
cgcacgggctgggcggcctggctgctgcggatcgtcgcctggggcgccggcctggcgatc
gccggcgccgtgtcggtggccatcgtcatcgcgatcgcgctgtcggtcgcctaccccaac
ctgcccgacatttccgacctgtcggactaccgccccaagctgccgctgcgggtgttctcg
gccgaaggcacgctgcttggcgaattcggcgaggagcgccgcagcctgacgccgatcaag
gacattccgcaggtcatgaaggacgcggtgctggccatcgaggacgcgcgcttctaccag
cacggcggcgtggactacaagggcgtgctgcgcgccgccatcgccaacctcggccgtgtg
aagagccagggcgcctccaccatcaccatgcaggtggcgcgcaacgtgtacctgtcgtcg
gagaagaccttcacgcgcaagatctatgaaatcctgctgaccttcaagctcgagcacctg
ctgagcaaggaccagatcctcgagatctacatgaaccagatctacctgggcaaccgcgcc
tacggcttcgccgcggcctcggagacctatttcggcaagccgctgaaggacatctccatc
gccgaggccgccatgctggccggcctgcccaaggcgccgtcggcctacaacccgatcagc
aatcccaatcgcgcacgcacccgccagcagtacatcatcgaccgcatggccgagaacggc
ttcatcaccgaagaccaggccgccgccgcgcgcaaggaagaactcagcgtgcgcagcggc
gccaacgccaaccgcatccacgccgaatacgtgaccgagaccgtgcgccagctgatgtac
gcgcaatatggcgacgagacctacacccgcgggctgaacgtctacaccacgctgcgctcc
gcggaccaggacgtggcgtacaaggcgctgcgccgcggcctgatggacttcgaacgccgc
cagatctaccgcggccccgagaaattcgtgaccctgcccaaggacccggccgagctcgac
gacgccatcgacgaggcgctgctcgaacatcccgacaacggcgacgtgatgtcggccatg
gtgctcgacgcgaacccgaagaagatcaccgccgtgcgtggcaacggcgacgcggtggag
atcaccggcgaaggcctgaagcccgcgcagtcgggcctggccgacaaggccccgccgaac
atcaagctgcgccgcggcgccatcatccgcgtagccaagacgcccaaggacacctgggag
atcacccagttgcccgaggtggaaggcgcgttcgtggcgctcgacccgcgcgacggctcg
atcaaggcgctggtcggcggcttcgatttccagaagaacaagttcaaccacgtgacgcag
gcctggcgccagccgggttcgagcttcaagccgttcatctactcggctgcgctcgagaaa
ggcttcaccccggccaccgtggtcaacgacgcgccgctgttcttcgacgccggcaccacc
ggcggccagccctgggagccgaagaactacgacggcaagttcgaaggcccgatgaccttg
cgcaccgcactcgcgaaatcgaagaacatgatctcgatccgcatcctgcaggccatcggc
gcgcagaacgggcaggaatgggccacgcatttcggcttcgatgccgacaagcacccggcc
tacctcacgatggcgctgggcgccggctcggtcacgccgatgcagatggccagcgcctat
tcggtgttcgccaacggcggctaccgggtgaacccgtggatcatcgccaaggtcaccgac
cagcgcggcaaggtgctcgccgaaaccaagccgccggtgctcgacgaatcggtgcgcgcc
atcccggcccgcaatgccttcgtgatggacagcctgctcaacgaggtcgcgacccgcggt
accgcggcgtcggccacgcgcatcctgaagcggcccgacctctatggcaagacgggcacc
accaacgactccatcgatgcctggttcgccggcttccagcccacgctggcggccgtgacc
tggatcggctacgacacgccgcgcaacctcggctcgcgcgaaaccggcggcggcctgagc
ctgccggtgtggatcaacttcatggagaccgccctcaagggtgtgcccgtggctccactc
gtgccgcccgaaggcgtggtcaacgtcggcggcgaatggttctacaacgaatacgcgcgc
agcaccggcgtgaccagcctgggcctggacgacaagggtgtgggcggcgccggtggcacg
gagccgccgcatcccgcgcctgcggcggaagaacgcaaccgcatcctggatctgttcaag
aactga
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